RNA id: XM_043223138.1


Basic Information

Item Value
RNA id XM_043223138.1
length 4449
RNA type mRNA
GC content 0.45
exon number 35
gene id aox5
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7494661 ~ 7514404 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCAGAAGCATCTACAGCAATCCTTCTCAACTCATCATGTCATCTGTATCTGTGAACAGTGAGCTTATCTTTTACATTAATGGCAAGAAGatAGTAGAGAAGAATGCTGATCCAGAAGAGATGTTATTGGCTTACCTACGAAGAAAAGtgGGTCTGACAGGCACAAAGTATGGCTGTGGTGGAGGAGGATGTGGGGCCTGTACTGTGATGGTGTCCAGATACGACCCTGTTCAGGACATTGTGCTTCACTGGTCAATAAATGCTTGTCTGCAGCCAATTTGTTCTCTGCATGGTGCGGCGGTGGTGACCGTCGAAGGCATTGGAAGCACCAAGACCAAACTGCATCCTGTTCAGGAGCGTATAGCAAGGGCTCATGGGTCTCAGTGTGGGTTTTGTACACCTGGGATGGTGATGTCCATGTACACATTACTGAGAAACAACCCATGTCCAACCATGGAAGACATTCGAGAGACACTAGGAGGGAACCTGTGTCGATGTACTGGATATCGGCCGATAATTGATGGTTTTAAAACATTCTGTGACACTCCGATACCTTGTCAAAATGGTGACGGAAATGGAAAATGTTGCATGGAAAACAGCAATTCTCACAATTACTCTGATATATCTGGAGAACTTTTCAGCATGGATGATGTCTTACCCCTTGACCCAACTCAGGATCTAATCTTTCCTCCAGAGTTACTGATTTTGGGAAAGAAAAAAGCTGGACGACTTTGTTTCCAGGGTGAAAAGGTCAGGTGGATTTCCCCAGCAGACCTAAAAGATTTAATCAAGCTTAAAAGTGAACACCCCAACGCACCTCTGTTGGTTGGGAACACAACCATAGGGCCAAAAATGAATCTGAAGGGAAATATCCATCCTTTGGTGATCTATGGTGGAAGCATTCCAGAACTTCGAGTTATCAAATGGAAGAACAATGgCATAACTGTAGGGGCAGGATGCAGTTTGTCTGTTCTGAAGGACATCCTTCTGCAAGGAATTGAGGATCTCGGGCCAGAAAAAAGCAGGGTTTACCAGGCCCTCGTTCAAACATTACAATGTTTGGCTGGCAAACAGATACGCAACATGGCTACCATTGGTGGAAATATCCTCAGTGCCAACCCCAAATATGACTTGAGCAGCATTCTAGCAGCAGTGGAGTGTACACTACACATTGTTTCTAATGatgGAGCTCGAGAGATTTGTCTAAGTGAAGAGTTTTTCACAGACTTTGGTAAAACGGCTCTGCGACCAGATGAGATTCTGCTGGCTATTGACATTACTCACTCAAGTCCgTGGGAGTTTGTGTCTGCGTTTCGTCAAGCACAGCGCAGAGAGTTTGCCTTCTCCATAGTGAACGCTGGCATGAGGGTGGTGTTCAGACATGACTCAAATGTGGTGGAGAATCTGGATATCTTTTATGGAGGTGTGGGACCAACTCTGGTAAAAGCCAGACGCACCTGCAAAGAGCTGACAGGAAGAAAATGGGATAAGAAACTTTTGGTAGAGGGAACACAGCTCTTAGAAGAAGAAATTTATGTGTCCCCTACTGCCCCTGGTGGACGGGAAGAATATCGCAAGGCTCTAGTACTCAGCTTCTTTTTCAAGTTTTACATGCAAGTGTTGCTGGAGCTCCAACAAAAGGATGCTGGCACGAATGATTTGCCATTAGAGTATCTCAGCACATTAAAACCTTTCAAAAATGAGGTGCCCCAAGGAAACCACTCATTCCAGCTTGTACCAGAGACTCAGTCTTTTAGTGACCCAGTAGGACGTCCCAACATACACCAGGCTGCCCTTCAGCAGGCTACAGGAGAAGCTGTGTATTACGATGACATTCCATCTGTTAAAGGAGAACTCTTTGTTTCCATGGTAACCAGCACAAGGGCTCACGCAAAAATCATCTCTATAGATGCATCAGTGGCCCTAACCATGTCTGGAGTGGTCACCTTCATCTCCGCCAAGGATGTCCCTGGTCAGAATCGGAGACTCTGGTTCAACAACCCAGAGGAGCTTTTTGCAGAGGAGGAGGTAATTTGTGTGGGGCAGATTATTGGTGCCATTGTGGCTGAAACCAGAGAACAAGCCAAGCGAGCAGCTGagcaggtggccatttcttacCAGGACATCCAGCCTGTCTTTTTTACTATAGAGGAAGCCATTGAACACCAGTCATTTTTTGATCCCAAGAGAAACCTAGAAAGAGGAAATGTGGAAGAAGCCTTTGAGAAGTCAGACCACATACTAGAGGGTGAACTGTATATGGGTGGTCAGGAACATTTTTACATGGAAACTCAAGGATTGATTGCAATTCCTAAGGCAGAGGCAGGTGAACTGGAGCTTTTTGTTGCCAGTCAGCATGCAGCTTATACTCAGGAAGTGGTTGGCATCACTCTCGGCATCGACTCCAATAAGATCACATGTCATGTGAAGAGGCTAGGAGGTGGATTTGGTGGCAAAGTCATGAAGATTGCATCATTATCTGCCATCGCTGCTACGGCCGCTTACAAGACTGGCCGTGCTGTGCGATGTGTACTAGAACGTGGAGATGACATGCTAATCACTAGTGGCAGGTCCCCGTTCTTGGGAAAGTACAAGGTTGGATACATGAATGATGGAACAATCCTGGCTGCTGATATCACATACTACAGTAATGGAGGATGCACCCTAGATGAATCCTCTTTTATCATGGAGAAAGCTCTCCTTCACATGGATAATGGTTACAAGATTCCAAATCTGCGTGGACGTGGACTAGTGTGCAAGACTTACTTACCCTCATACACAGCCTTCCGTGGCTTTGGTGGACCTCAAGGGTTGACCATCATTGAGAGCGTGCTACATGAGGTGGCCACCAGGTCTGGCTTACCTGCACATCAGGTGAGAGACATCAACATGTACCAGGACGAGAAATGCTACACCCACCACAAGCAGCTCTTTTCTCCTCACGACATGGTACGGTGCTGGAACGAGTGTCTCGAGAAATCCGACTACACAAATCGATGCATTTATATCGAGCAGTTTAATGCCCACAACCACTGGAAAAAGAGAGGGATCTCCATTGTCCCACTGAAGTTTGGAATTGGATTCTCCAAAGGCTTCTATAACCAGGGAGCAGCATTGATAAACATCTATAAAGATGGATCGGTTCTGATCTCACATGGAGGAACCGAGATGGGTCAAGGTATCAACACAAAAGCCATGCAGATTGCAAGTCGCATTTTGAAGATTCCAATGTCTTCAATTCACATCAAGGAGACTTGCACAGGAAACGTGCCCAATGCTGCACCATCTGCTGCATCCTTTGGCACAGATGCTGTCGGGATGGCAGTCAAGAATGGTTGTGAAAAACTAATGATACGCCTCGAGCCACTCATTAAGAAACATCCCCATTACACCTGGCAACAACTGGTGGTGGAAGCATATGGCCAGAAGATCAGTCTGTCAGCAACAGGTTTCTTTATGGGCCCCCATACCAGTGTTGACTGGGAGAAAAGTGAGGGTAATGCATACTACTACTTTACTTTCGGGGCCTGTTGCTCAGAGGTGGAAATTGACTGCTTGACAGGAGATCACAAGaatattaGAACTGACATCGTCATGGATGTTGGTCGGAGCATTAACCCTGCTCTGGATGTTGGACAGgTAGAGGGAGGTTTTGTCCAGGGAATTGGACTCTATACTATAGAAGAGTTGCAGTTTTCTCCTGAGGGTGTGTTGTTGACCAGGGGTCCCTCTCAGTATAAAATCCCAGCTCTGTGTGACGTCCCTCCTCATTTTAACGTTCACCTGCTGAGGAACGCAGACAATCCTTACGCCATCTACTCCTCAAAGgGGATTGGGGAGCCTCCTGTGTTTTTCGGCTGCACTTTGTTCTTTGCCATTAAAGAAGCTATTGCAGCCGCACGGAGAGAACGAGGACTGAGCGACATTTTCCATTTCTCTTCTCCTGCTACTTCAGAAAAGATACGTATGGCCTGTGAAGACTGCTTTACAAGGATGAATTCACCAAACAAGAAAGTAAAAACCAAACCCTGGGCAATCAACatgtgaagaaaaacaacagtttattcAATCTTTGTAATGCCTCACTTAAACAAGCTGTCCCTTACTTTTCATTGAGACTTTGAGCTCATAAACTGACTAAAAGTTCATACTCTTAACTCTTAATTCCAGCTTccttaatatgtttattatgcagTTAATGTTTCATTAAAGCAGTAAGGAACTTTCTTAGTCAGTTGTAGGATGTAGATTAATTGAATccacatttattgtaataaaaatcgTGTAGAGTCAACTGATTCATGTGAGATGAAATTAACACGTGTTAATAACAGGcttgaataataaaacattgttattGAGAGATCAATGCATGCAGAGCTTAATTTGTTTGTGAGAAAACTGCtgataatttaatataatactgtaaatGTCTTGTGATTTGATAAG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0004854 xanthine dehydrogenase activity molecular_function
GO:0004855 xanthine oxidase activity molecular_function
GO:0051537 2 iron, 2 sulfur cluster binding molecular_function
GO:0051287 NAD binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU222925 lncRNA downstream 9727 7483864 ~ 7484934 (-) True G150626
XR_006247703.1 lncRNA downstream 24517 7469472 ~ 7470144 (-) False LOC122327668
TU222918 lncRNA downstream 25087 7450248 ~ 7469574 (-) True LOC122327668
TU222888 lncRNA downstream 71262 7409413 ~ 7423399 (-) True G150596
XR_006247596.1 lncRNA downstream 198106 7290672 ~ 7296555 (-) True LOC122327085
XR_006247719.1 lncRNA upstream 110295 7624699 ~ 7628851 (-) True LOC122327778
XR_006247773.1 lncRNA upstream 132707 7647111 ~ 7652174 (-) True LOC122328071
TU223036 lncRNA upstream 343919 7858323 ~ 7866902 (-) True G150706
XR_006247569.1 lncRNA upstream 386184 7900588 ~ 7952064 (-) False LOC122327072
XR_006247591.1 lncRNA upstream 386184 7900588 ~ 7952042 (-) False LOC122327072
XM_043222264.1 mRNA downstream 105477 7387057 ~ 7389184 (-) True s100b
XM_043222263.1 mRNA downstream 105542 7387057 ~ 7389119 (-) False s100b
XM_043223787.1 mRNA downstream 210876 7234901 ~ 7283785 (-) False cntnap5b
XM_043223788.1 mRNA downstream 210887 7234901 ~ 7283774 (-) False cntnap5b
XM_043223786.1 mRNA downstream 210887 7234901 ~ 7283774 (-) True cntnap5b
XM_043223417.1 mRNA upstream 335 7514739 ~ 7515901 (-) True LOC122327800
XM_043222302.1 mRNA upstream 3396 7517800 ~ 7518955 (-) True LOC122327121
XM_043222303.1 mRNA upstream 7314 7521718 ~ 7522892 (-) True LOC122327123
XM_043222240.1 mRNA upstream 10032 7524436 ~ 7525617 (-) True LOC122327064
XM_043223399.1 mRNA upstream 23233 7537637 ~ 7542060 (-) False si:ch211-246m6.4
TU222808 other downstream 439459 7030307 ~ 7055202 (-) False LOC122327113
TU222752 other downstream 581103 6906000 ~ 6913558 (-) True G150492
TU222739 other downstream 605004 6854770 ~ 6889657 (-) False nab1a
XR_006247718.1 other upstream 95452 7609856 ~ 7618398 (-) False LOC122327776
XR_006247717.1 other upstream 95452 7609856 ~ 7618398 (-) True LOC122327776
TU223633 other upstream 1369717 8884121 ~ 8886941 (-) True G151107
XR_006247692.1 other upstream 1499144 9013548 ~ 9171931 (-) False nfia
XR_006247693.1 other upstream 1499144 9013548 ~ 9171929 (-) False nfia

Expression Profile