RNA id: XM_043223239.1


Basic Information

Item Value
RNA id XM_043223239.1
length 7950
RNA type mRNA
GC content 0.47
exon number 45
gene id unc13a
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10721100 ~ 10759871 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACGTCACGGTAGTAGCTCTCCTCGCGGCGGCGGTGCTGAACAAGATGGCTGCGCGTCGCGTTACGAGCGGCTGAAAAAACAGCGCCGAGGACCGCACACAGCCCGACTAACAGCGGGTCACGTCGAGAGGGCTGGCCGAAAGCACCCTCGGCTCGAACGATCCGGAGGGCTCGGAATAGGGCTgttgcttttgtaatttttttgtttagggGGGTGGGTAGAGTTTGATTTACGGGAAGGGAGGTTTCTCAACGtccagaaaaaaagcaaaaaaatccgcGAGTCGTTTTTGCAACTGTTTAATTTATCTAAAACAACGCGGAAGGGCGAAAATAATAAGTATTAAAGAGATGTCACTGCTGTGTGTTGGAGTGAAGAAAGCCAAGCTTGATGGACCGCAAGAGAAATTCAACACGTACGTGTCACTGAAGGTTCAGAACGTGAAAAGCACCACCATAGCCGTGCGCGGCAGTCAGCCATGTTGGGAACAGGACTTCATGTTTGAGATTAACAGGCTGGATCTGGGCCTGACGGTGGAGGTATGGAACAAAGGACTGATCTGGGACACCATGGTTGGCACATTGTGGATCCCTTTGCGCAGCATTCGACAGTCGAACGAGGAAGGTCCAGGACAATGGCTGACTTTAGACTCCCAGGTCATTATGGCTGAGAATGAGATCTGTGGAACAAAAGATCCCACGTTCCATCGAGTGCTTTTGGATACACGATTCGAACTCCCATTAGATATACCAGAGGAGGAAGCTCGATACTGGGCCAAGAAATTGGAGCAGCTCAATGCCATGAGGGACCAAGATTACACATACCAGGAGGAGCATGAGAGACCACTTCCAGTGCCATCAACTCAATGCTGTAACTGGAGTCTATGGGGGGACCAGCAAAATGATGATCCAGACAGTGCTGTTGACGATCGAGACAGTGATTACCGCAGCGAAACCAGCAACAGCATCCCGCCTCCATTCTACACCACTTCTCAGCCCAACGCATCCATGCACCAATACCCCATCCGTCACATGCACCATGGCTCCCGCTACAACGACATGCATGATTACGACTATGATAACCAGAGACCCATTAGCCCCACCGGCAGTAGTCGCTATGCCTCCTCGGGTGAGCTAAGCCGCGGCAGCTCCCAACTCAGTGAGGAGTTTGGCCCAGAGGATGGTGAAAGCTTCCGAGGTTCCGGAGAGTTCTACGACGAGAATGACTCCTACCATTCCTGCCATTCCTCTGTTAGCTATGGTAAAGACTCACCTGATTGGGATCCAGAAGAGCCGCAGGGCGTTTACAGTGATGATGGGGAGTATAACAAAGATGGGGGTGAAGAAGGTGCACTCTATGATGAGGTGGATGGTGAGATCTATGAGCAGGAGGAAGGAGAGTATCCctatgaggaggaagaggaaggaatGGTGTATGAAGAGGATGAAGACCTGTACCCACTGGATGGTACTCTCAGTGAAGAGCAGGAGCCACCTTACACCCCTACCCCAACCAGCACTGCCCCAACGTTGGCTCCTGATGCCCAAACCAGCCGTCCACCTCTGGAGAAACAGGCTTCCATGCACCAGCAACAGCCACCACAATCTCAACCACCATTCCAGGCCATGGAGCCTAAGCGAGAGTCACCACCCCCACAGCAGCCACTTGATGTCTTTGCCAAGTTACCTCATACCTCAACCCCACCGCGAGTCTCAGAGTTGGAGCCTGAGAAGGTCCCGACACCTACAGGCAAGCTGGCAGCTCCTTCTGAGGAACTTTTGCTTACCCCTGCTACCGAGGTCCCGCCTGAAGCAAAACAAGAGAATAAAGAGGCTCCTCCAGAGAGCACACCAAAGCTGGAGCCACCTGTGGACCCTGCAGTAAGGGCCAAGGCCAACTGGCTGCGACTTTTCAACAGGGTTCGCCTTCAACTTCAGGAGGCTCGAGGCGAGACTCCAGGACTTGCGTCACTCTTTTTGCAAGCAGGGCCTGGAGGTGCTCTTTACAGCATAGACAGCATGCCTGACCTACGCAAGAGGAAAGCCATCCCTCTCGTCCGAGACCTGGCAATGTCTCTCGTCCAGAACTCTCGAAAAGCAGGCATCACTTCAGCTATGGCCTCCAGCACACTTAACAATGAAGAATTGAAGAGTCACGTCTATAAGAAGACCCTGCAGGCTTTGATCTACCCCATTTCCTGTACTACACCACACAACTTTGAGGTGTGGACCGCCACCACCCCCACCTACTGCTACGAGTGTGAGGGGCTTCTGTGGGGCATCGCTCGACAGGGCATGCGCTGCACAGAGTGTGGGGTCAAGTGTCACGAGAAGTGTCAAGATTTGCTTAATGCCGATTGTCTACAGAGGGCGGCGGAGAAGAGCTCTAAACATGGAGCTGAGGATCGCACACAGAACATCATCATGGTGTTGAAAGACCGCATGAAAATCCGTGAACGCAACAAGCCTGAGATATTCGAGCTGATTCAGGATGTGTTTGGAGTCATCAAGGCAACACACGTGGCGCAGATGAAGCAGGTCAAGCAAAGCGTCCTGGACGGGACATCTAAGTGGTCAGCCAAGATCAGCATCACCGTATTATGTGCTCAAGGCCTGCAGGCAAAGGACAAAACTGGCTCCAGTGATCCTTATGTTACAGTGCAAGTAGGCAAAACCAAAAAACGAACCAAGACCATCTACGGCAACCTTAACCCTGTATGGGATGAGAGCTTCAATTTCGAGTGTCACAACTCTTCCGATCGGATTAAAGTGCGCGTTTGGGACGAGGATGATGACATCAAGTCCAGAGTAAAGCAGAAGTTCAAACGAGAGTCTGACGATTTTCTCGGACAGACTATCATTGAGGTTCGAACTCTGAGCGGAGAAATGGACGTCTGGTACAACCTGGACAAGCGTACGGACAAATCTGCTGTATCTGGAGCCATTCGCATGCACATCAGTGTGGAGATCAAAGGAGAGGAAACCGTAGCTCCGTACCATGTCCAATACACTTGCTTGCACGAGAACCTTTTCCACTATCTAACGGACATCCAGAACAACGGGGTGGTGAAGATACCAGATGCCAAGGGTGACGATGCATGGAAGGTCTACTTTGAAGAGACACCCCAAGAAATCGTAGACGAGTTTGCCATGCGTTACGGAGTGGAGTCCATTTATCAAGCCATGACGCACTTCGCCTGTTTGTCATCAAAGTACATGTGTCCCGGAGTGCCCGCGGTCATGAGCACCCTACTGGCCAACATCAACGCTTACTACGCTCACACAACCCAGGCCACCAACAACGTGTCAGCCTCGGACCGCTTCGCTGCCTCCAACTTTGGGAAAGAGCGGTTCGTCAAGCTTCTGGACCAGCTTCACAACTCCCTGAGGATTGACCTCTCTATGTACAGGAATAATTTCCCAGCTAGCAGTCCTGAGAGACTGCAGGACCTCAAGTCTACTGTGGATCTACTAACCAGTATCACATTCTTCAGGATGAAGGTCCAGGAGCTCCAGAGTCCTCCTCGTGCCAGCCAGGTAGTGAAGGACTGTGTGAAGGCTTGCCTCAACTCTACCTACGAATACATTTTCAACAATTGCCACGAGCTATATAGTCGAGAATACCAAACGGACCCGAACAAAAAAGGAGAGGTTCCTCCAGAAGAACAAGGTCCAAGTATCAAGAATCTCGACTTCTGGTCTAAGCTAATCACCCTCATTGTCTCAATTATCGAAGAGGACAAGAACTCCTACACCCCATGCCTTAACCAATTTCCGCAAGAGCTCAATGTTGGAAAAATCAGTGCAGAGGTTATGTGGAACCTGTTCGCACAAGATATGAAGTACGCAATGGAAGAGCATGAAAAGAACCGCCTGTGCAAGAGTGCCGATTACATGAACCTGCACTTCAAAGTAAAGTGGCTCTACAATGAATACTGCAAAGATCTGCCTTTCTTCAAGAGCCGAGTGCCTGAATATCCCACGTGGTTCGAGCCATTTGTCATCCAGTGGTTGGATGAGAATGAGGAGGTGTCTCGAGACTTTTTGCACGGAGCCCTGGAGCGCGACAAGAAAGATGGGTATCAGCAAACTTCAGAGCACGCTCTCTTCTCCTGCTCGGTAGTGGACGTCTTCTCGCAGCTTAACCAGAGCTTTGAGATCATTAAGAAACTGGAGTGTCCAGACCCACAGATCGTCGGACACTACATGAAGAGATTTGCCAAGACCATTAGCAATGTTCTTCTGTCCTATGCGGACATCATTTCAAGAGACTTCCCCAACCACTGCACCAAGGAGAAAGTGAATGCAAAGGATGGAGCTGTCAAGCCATGCATCCTCATCAATAATATCCAACAGCTCAGGGTACAGCTTGAGAAGATGTTTGAGGCCATGGGTGGTAAAGATTTAAACGTTGAAGCTAGCGACATCTTGAAGGAACTTCAAGTAAAGCTCAATAATGTTTTGGATGACCTTGCAAGGATCTTTGCTACCAGTTTCCAGCCAAACATTGAAGAAAATGTCAAGCAGATGGGTGACATACTTAGCCAGGTAAAGGGAACAGGAAACGTGCCAGCAAGCGCTTGCAGCAGCGTGGCACAGGACGCCGACAACGTCCTCCAGCCCATCATGGACTTCCTTGACAGCAATCTCACACTGTTTGCCAAGATCTGTGAGAAGACAGTGTTGAAGCGAGTGCTGAAGGAGCTTTGGAAGCTGGTGATGAACACAATGGAGAAGACGATTGTTCTGCCACCTTTGACTGACCAAACGATGATAGGCAGGGTGAAGCTTGCTTGTCACAGTGATGGCACTCAGCTTATATTCAATGCCGCCAAAGAACTCGGTCAGCTCTCCAAGTTGAAAGAGCACATGGTTCGTGAGGAGGCCAAGGCACTGTCCCCTAAACAGTGTGCAGTTATTGAGTTAGCACTGGATACTATAAAGCAATACTTCCATGCTGGAGGTGTGGGGCTGAAGAAGACGTTCCTGGAGAAAAGCCCAGACCTGCAGTCTCTGCATTACGCCCTTTCCCTCTACACTCAGGCCACCGACAAACTCATCAAGACCTTCGTTCAGTCCCAGAATACACAAGTTCATGGAGGGAAGGGGGTAAGGTTCACCCATAGCGAAGACGTGTACCCAGAGAAGGGTACTGGTGTAGACGATGCAGTCGGAGAGGTGTCTATCCATGTAGAGATCTTCACTCATCCAAATACGGGAGAGCACAAAGTCACAGTGAAAGTGGTGGCTGCGAATGACCTACGTTGGCAGACTTCAGGAATTTTCCGTCCCTTCGTGGAGGTCTACATCATTGGCCCTCATCTCAGTGATAAGAAGAGAAAGTATGCCACCAAGTCCAAGAACAACAGCTGGGCTCCCAAATACAACGAGACCTTTACTTTCACACTGAGTAACGAAGTGGGCCCGGAGTGCTATGAGCTGCAGGTGTGCGTGAAAGACTACTGCTTCGAGCGAGAGGACCGCACCGTTGGCATGGCGGTACTGCAGCTGAAAGACGTAGCACCGCGGGGCAGCGTAGCGTGCTGGCTACCGCTAGGTAAACGCATTCACATGGACGAAACCGGCCTGACCGTACTACGAATCCTGTCCCAGCGCAACAACGATGACGTCGCGAAAGAATTCGTCAAGCTTAAATCCGACCAGCGCTCTGCTGAGGAGGGGCGGAGCTAAGACCAGGAAGTAGCTAGCGAGGCATGATAACTTTGGTGTAAACACTGCCCCCTGATGTTCAGATGTTGCACTAGcacatagaaaaaaatacacaagatTTATCTCGGTTCTCTACTTTACTCTAACGTCCAAACGTTTACGTGACAAAGcagttatatatttgtattcagtgCACTGCCATTAGAATTGCCAGGAAGGGCTTGTTTATCAAGCACAATTTGGCACATGAAACAGACACAGGATATTGTATGTCTTAAATACTTGATGTTTGTGATGTCTTTGatttttataaagcatatttCAAGACAAAAACCTGCCAAAAGGTACAACacatatttatctatctattctTCAGAACATTAAATATCACTATTAATGCACAGGTCTCAAAATATAAAtccagaaaatattatttataatagtatattatttataatagtagtaaatatttaaataaataaatatatatatatatatatatatatataaaaaaataataaaagactaTATCAcagtagtaatatatatatatatattatttataatcagATTTTTTCAAATGCATCTGTGAAATAAAACCAGATGAAGGCATGTAAACATGACAGAGTGCTACACAGTGCCATGATTTTTCGTACCCTTTTTTTCTTCAACATTCAGCAATCTGTAATGATGTCAAACCTCTTTCGTGCGGCCTTTTGTCAATCATTCCTGCACCCTTCGAAGGGTGCCTTAATGTCAGGGTCTCGTTTCTCCACTACGTACAACCATTTCACCCCTTAACCTCCTTAATAGGGACCAAAACCCCCTATGGGTCAGACTTTAACGTTATGCAATCGTTTAGAAGCACAAGAGAATTATGAAAAACAGACCTACAACCAAATACACCTCTGAAAGCAGAGTGGTTGCTTTTTCATGTAGTCCGAAAATGCGTAAAGTTATTTTGAAGGGGGCGCCACTTGCAGGAAATCCTATAAATTCTACGTATCGTACAAATACAAGATACTTAGACGCTTCACGCATCTAGATTCAATCACAGGGCCACCTCTGTCCTGTCCTCGTGTGTTTTCCGATCCGTTCAAGTTTGAGTGCCTGTGCGGTTTATCCGGTGTTTGTCGGCACGATAAGGCACTACGGTTTATACGATGTATAAATTGACAAACACTGCTTGTGTTAGACACCAGAGCTGCCTGTTTCAGTAAAATTTCACTTTATAACGTCACGTTTAAATGTCGCACCGCTTCAGATCATTCCGTGCAAAATGGGACGTTTTTCCCCACTCGCTGGTTTCACACCTCGGAAGAATCACAGTCATTGAGAATCTCTCCTATAGAGTTGCCATAGTAACCGCTGATGAATCCTGCCATTTTACTGGAAAACCATCCACCATATTAGAAAAGCACAAGAGATACGCTCTACAGTGTGGGTTAAACGCCGTACACCCGTTCATTCCCTAAGCGCTAAAACGTGCTACTTCGCGAAAATCTGAGGTGAAGTTATCGAGATTTAGCCACGAAGTGCGACAGATATTTCCCCGCATCGTTTCTCCCGAAAATAGTCTATGCATTTGTTCTATCAGTCATAAGTGATCAACAGCCTTGGATTGTTTACATCGCGAACGCTCAGCGCAAACCGTAGCTGCAAACTtcgctgttgttttgttttaccgACCGAATCCTTTTATGTTCAGTGTTGTGATATTGAACACTAGGGTTCTGCCAGGCGTTATTGAATGTTGAATTGACTGCAGAGCGGGAAAATAGAATCTGTAGCAAGAACATACTTTCATTTGGGCAGTAGgatttcaaatattaaagctGTGTGTTGCTGTTTGTGAATAATATTACAGGATACAGTCGTGAGCATGTAGTACGAGACAAAGCACACGCAGACACAAGTGCACACGGATCCCAATAAAACGGCGACTCCTTGCCTGTATATAAGAAGCAGTGCATGTTGGGAAAGATTCTTCTTTGTGCCAGCATGTATCTTTGGCGTGATATTGAATAGTTGTCTTTATTTCTCttgattttgtcatttattttgatatttgggtattattttctatttttggaaGGCttgtgaatatataaatatgtattactGACGTGTAGTGGTACAGAGTTACTAGCATGAGAGATTTTTTTATACGAAGATGTTTCTAATTTTCGTTTTTCTAAATATGATCGTTCTTATCGGGGATGGAGGTAAAACAGATGGCGGCCTTGGTTTGTTTCTACTTCCAATAAATGGTTGAAAATTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU224316 lncRNA upstream 9129 10710513 ~ 10711972 (+) True G151603
TU224309 lncRNA upstream 11346 10707399 ~ 10709755 (+) False LOC122327757
XR_006247710.1 lncRNA upstream 11353 10701873 ~ 10709748 (+) True LOC122327757
TU224310 lncRNA upstream 18773 10701622 ~ 10702328 (+) False LOC122327757
TU224294 lncRNA upstream 51889 10666056 ~ 10669212 (+) True G151592
TU224372 lncRNA downstream 17856 10777727 ~ 10840314 (+) True G151624
TU224374 lncRNA downstream 20007 10779878 ~ 10787611 (+) False G151624
TU224394 lncRNA downstream 70987 10830858 ~ 10831344 (+) True G151642
TU224444 lncRNA downstream 130107 10889978 ~ 10892023 (+) False onecut3a
TU224464 lncRNA downstream 172792 10932663 ~ 10932995 (+) True G151703
XM_043223318.1 mRNA upstream 784 10716240 ~ 10720317 (+) True hmg20b
XM_043223909.1 mRNA upstream 257904 10457205 ~ 10463197 (+) True rgmd
XM_043222316.1 mRNA upstream 294794 10422888 ~ 10426307 (+) True hsd11b1la
XM_043223903.1 mRNA upstream 302885 10413349 ~ 10418216 (+) True LOC122328195
XM_043223901.1 mRNA upstream 308647 10410257 ~ 10412454 (+) True LOC122328194
XM_043223328.1 mRNA downstream 95944 10855815 ~ 10857119 (+) True foxq2
XM_043223288.1 mRNA downstream 114557 10874428 ~ 10890192 (+) True onecut3a
XM_043223333.1 mRNA downstream 158218 10918089 ~ 10922031 (+) False si:dkey-172o19.2
XM_043223334.1 mRNA downstream 158702 10918573 ~ 10922031 (+) True si:dkey-172o19.2
XM_043223326.1 mRNA downstream 163877 10923748 ~ 10930951 (+) True nfil3-4
XR_006247780.1 other upstream 11991 10709044 ~ 10709110 (+) True LOC122328232
XR_006247720.1 other upstream 727660 9970622 ~ 9993441 (+) False gatad2ab
TU223980 other upstream 757467 9923547 ~ 9963634 (+) False LOC122328159
TU224353 other downstream 46181 10806052 ~ 10837365 (+) True G151620
TU224351 other downstream 56264 10816135 ~ 10837365 (+) False G151620
TU224458 other downstream 159189 10919060 ~ 10921928 (+) False si:dkey-172o19.2
XR_006247707.1 other downstream 558818 11318689 ~ 11323940 (+) False mier2
TU224828 other downstream 1063063 11822934 ~ 11824055 (+) False LOC122327289

Expression Profile