RNA id: XM_043223343.1


Basic Information

Item Value
RNA id XM_043223343.1
length 2064
RNA type mRNA
GC content 0.47
exon number 7
gene id amh
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 10997306 ~ 11000986 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTGTTGACCCACCCTAAAACAAGTGCTGGATTTCTCTGCGATTGTGTGAGAGAAGATGCTTTTCCGTGCAAGATTTTGGCTGGTGCTGTTGCTGACTGTGGCGATTTGGTCATATGGTACCAGTGTAGGACACAAAGAGCAGGATAGCAGCCAGAAGGTCACCCAACAATCAGGATGGAACGGAGATGAGCAGGAAGTTACAGATATGGTACGCATACCCCGCAGCGCCAGTGAACAGCCGATTGCTCCATCCTCTGTGGACGTGCCGTGTGATGAAGAGCAACTAGCTCGCAGTCTTGCCATGGATGACTTCCTGTCAGCGTTGAGCAGAGAGAGCGAATTCGAGAGTATGGAATCCCAGCGGTTTGGAATATGTTCCCCTGGAAGTTCAAGTCTGCAGATTTCACGGCTAGTACAGAGTTTGCAAAAACGAAGTAGTCTCAAGGGTGTACATTCCACAAAAGatatTTGGGATGCTGAAAAGGAAGGAGAGATGACTTTAACCCTCACATTCCCAAGAGATGCTCAACCGACCAGCCCAGCCTCTGTGATGCTCCTGTTCAGTGTCGATTCCATTAAAGGAGATGGTCTGAGAGTGAAATTCAACAGTCATTCCATCCATCCAAGTACACAGACCGTTTGCATTTCTGAGGTTACACGTTTCCTGGTTCTTACAGCAGGACAAAGTCATGCCCATGTTCACCTTAAACTAAGTGTAGCAATTGAGACATGGAAAGAGACGAAACCCAGTGTATCTGAGCTTCGGGACTTGTTGATGAAAAAGGTAGACAACAGCAATGTGTCAATGAGGCCGATCTTACTTTTCCTCTCTGACCGTGATGAGCAAAGGACACCGCACTTAAAATATCACGGaaatccaCTGGATGAGGAACTCCCTTCCAGAACTTATCTTTTCCTCTGTGAGCTGCAGAAGTTCTTGAGCGATGTCCTTCCTCAGAAAGAGGGACCGACCTCTCAGGAAGCTGCAAACAGTATCTATTTGGATGCGCTGCATTCTCTTCCACCTCTCAGCCTTGGAGTGTCATCCACAGAGTCTCTACTGTCAGGACTGGTCAATTCCTCCACGCCGACTGTATTTGTCTTCCCTGAGAGACAGCGAGGCCTGCAGAATCACAGAGTGGAGGTGACTCTAGATTCTCCTTTGCTGTCTGTGCTCAGAACGAGACTGGATGAAGCAACGGCTCAGGTGAAACAGCAGGAGGTGGGGCAAAAGGTGACTGACAGGCTTCAGAAACTGAGTAAACTAAGTGGCCTTTCTCCAGAAGTAGAGGACGATGAAGCAGTGGCTAAGGAACATAAACGGGCCCAGTACCGGTCCATTTTGCTGCTGAAGGCCCTGCAGATGGTACTCAGTACCTGGGAGGTGGAAAGAGCTCAGAGAGCAGCCAGAGCGGATGAAGATGGCCCAACGCTGCCCAGTCAGTGTCGGCTTCAGAGCTTGTCAGTGTCCTTGAGGAAGTTCTTACTTGAGCCTTCAAAAGTCAACATCAACAACTGTGAGGGAGAGTGTAGATTCCCTCTGACCAGAGGCAACAACCACGCCATCCTCCTGAACAGCCACATTCAGAGTGGCCAGCCCGTCAACCGCTCTCTCTGCTGCGTCCCGGTGGAGTTTGATGACCTGTGTGTGATCGAGCTGGAGAGCGAGGGCACCAACATCTCCTTCAAGACCAACGTGGTAGCGACCAAGTGCGAATGTCGCTGACGCTCCCTCCTTTTGTTCTTTGAAATGAGCTCATGAGTGCGCATTTAGCAACATATGGATAAAACCTGAtacatctgcatttatttttgcttgtaaacaCACAAAGTTCTAGGTTTTCTCAAACTGACCTGCTACATATGCAAACATgcaacataaaatgtcatttaatgtgTAAATTAGGTAATTATGGGGAAATTTAGCATATTCAGTGATATAAACAATTTTAGACCACTTTAGCTGTATGACATAATTAGCTGTCTTATTAACATGGATTTGCATCAGTGCTAaacgcattaaaatatttggctgcattagaataaaaaatattttaaaaagca

Function

GO: NA

KEGG:

id description
K04665 AMH; anti-mullerian hormone

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU224541 lncRNA downstream 2356 10935052 ~ 10994950 (-) True oaz1a
TU224465 lncRNA downstream 63885 10932994 ~ 10933421 (-) True G151704
TU224463 lncRNA downstream 64797 10930882 ~ 10932509 (-) True G151702
TU224427 lncRNA downstream 213064 10783638 ~ 10784242 (-) True G151668
TU224336 lncRNA downstream 281349 10715425 ~ 10715957 (-) True G151616
TU224552 lncRNA upstream 43011 11043997 ~ 11046227 (-) True G151762
XR_006247712.1 lncRNA upstream 154801 11155787 ~ 11159729 (-) True LOC122327759
TU224565 lncRNA upstream 175577 11176563 ~ 11179432 (-) True G151774
TU224566 lncRNA upstream 178936 11179922 ~ 11180390 (-) True G151775
TU224564 lncRNA upstream 183244 11184230 ~ 11185919 (-) True G151773
XM_043223332.1 mRNA downstream 2354 10991513 ~ 10994952 (-) False oaz1a
XM_043223329.1 mRNA downstream 13318 10981892 ~ 10983988 (-) True org
XM_043223330.1 mRNA downstream 13386 10981892 ~ 10983920 (-) False org
XM_043223276.1 mRNA downstream 34963 10937626 ~ 10962343 (-) True lingo3a
XM_043223246.1 mRNA downstream 90285 10892097 ~ 10907021 (-) False atp8b3
XM_043223244.1 mRNA upstream 2073 11003059 ~ 11028113 (-) True dot1l
XM_043223275.1 mRNA upstream 30736 11031722 ~ 11061071 (-) False ell
XM_043223274.1 mRNA upstream 30736 11031722 ~ 11061071 (-) False ell
XM_043223273.1 mRNA upstream 30736 11031722 ~ 11061070 (-) True ell
XM_043223299.1 mRNA upstream 61779 11062765 ~ 11075653 (-) True fkbp8
TU224207 other downstream 574971 10419127 ~ 10422335 (-) True micos13
XR_006247701.1 other downstream 675643 10286578 ~ 10321663 (-) False polrmt
TU224081 other downstream 1033680 9957811 ~ 9963626 (-) True G151425
TU223881 other downstream 1494300 9498680 ~ 9503006 (-) False gpx4a
XR_006247709.1 other upstream 173157 11174143 ~ 11188678 (-) False rex1bd
XR_006247708.1 other upstream 178718 11179704 ~ 11188678 (-) False rex1bd
unassigned_transcript_2544 other upstream 347394 11348380 ~ 11348451 (-) True trnaq-uug_21
TU225293 other upstream 1044483 12045469 ~ 12049531 (-) True si:ch211-117l17.6
TU225397 other upstream 1141856 12142842 ~ 12145575 (-) True G152276

Expression Profile