RNA id: XM_043223501.1



Basic Information


Item Value
RNA id XM_043223501.1
length 800
RNA type mRNA
GC content 0.49
exon number 4
gene id glrx2
representative False

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 12019242 ~ 12021636 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTGTCGCAGCGTTCAATGACCAGGACGGGCCGGTGGCGAACCATCGCGGCGACCCGCGGGGGGCGGGGCTTCCTCGCGTCACGCCGATGCGGTTCCGGAATGGGGAACTACTCGTCGGCGTCGCCTGGGTCGTCGAGCTCGGCTTGCTCTCGGTTCGTCCAGGATGTTGTTTCCAGTAACTGCGTTGTAATATTCTCCAAAACCACGTGCCCATACTGTAAGATGGCGAAGAACGTTTTTAATGAGATCGGAGCGACATATAAAGTTGTTGAGCTGGATGAGCACAATGATGGCAGTCGTCTACAGGAGACCTTAGCCCAAATGACAGGCGCCAGAACAGTGCCAAGAGTCTTTATTAACGGGCAGTGCATCGGAGGAGGCACGGATACCAAGCAGCTCCACCAGCAAGGGAAACTTCTTCCTCTTATTGAACAGTGTAGGCCGTGCTGTTCGAGTGCCTCCCCCGAGGCCTCCGGCGGCGCTCAGTATCAACATAATCAGTCATAATGCTCTGTGATATGTGTTTATACTCGTCGGCCACCCTTGAAGAGCCCAAACAGAGGTTAAGTAGATGTGTTTTAACATGCATGCTGCAGTCAGGGAAAATGTACTTTCCTGACTGATCGACATGGGTGCTGTTATTTTTGGGTTATTATGCACTGTATGTTttcttgtaaatatataatgccAAACGGTATCACGCCAAGCATTTTAGATTACTTTCTGACCTGAGTTACAAAACTTCAGCAGTCCtttatgtacataaatatttaaaataaagtattaagtCTTTTGCAAAA

Function


GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0007417 central nervous system development biological_process
GO:0005829 cytosol cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU224891 lncRNA upstream 12660 12006268 ~ 12006582 (+) True G151976
TU224886 lncRNA upstream 26442 11992590 ~ 11992800 (+) True G151972
TU224834 lncRNA upstream 151701 11867082 ~ 11867541 (+) True G151936
TU224829 lncRNA upstream 184139 11826565 ~ 11835103 (+) False LOC122327134
TU224830 lncRNA upstream 184139 11826565 ~ 11835103 (+) False LOC122327134
TU224954 lncRNA downstream 24216 12045852 ~ 12048265 (+) True G151999
TU224904 lncRNA downstream 26782 12048418 ~ 12249985 (+) False LOC122327127
TU224906 lncRNA downstream 26782 12048418 ~ 12276608 (+) False LOC122327127
TU224925 lncRNA downstream 26782 12048418 ~ 12267166 (+) False LOC122327127
TU224893 lncRNA downstream 140019 12161655 ~ 12235996 (+) False LOC122327127
XM_043222486.1 mRNA upstream 15386 11997220 ~ 12003856 (+) True b3galt2
XM_043222488.1 mRNA upstream 15386 11997220 ~ 12003856 (+) False b3galt2
XM_043222318.1 mRNA upstream 184108 11827299 ~ 11835134 (+) True LOC122327134
XM_043222519.1 mRNA upstream 194035 11822938 ~ 11825207 (+) True LOC122327289
XM_043223904.1 mRNA upstream 226077 11792550 ~ 11793165 (+) True LOC122328196
XM_043223499.1 mRNA downstream 481 12022117 ~ 12026752 (+) True uchl5
XM_043222476.1 mRNA downstream 35184 12056820 ~ 12077871 (+) True ccdc50a
XM_043222477.1 mRNA downstream 35195 12056831 ~ 12077871 (+) False ccdc50a
XM_043222359.1 mRNA downstream 60785 12082421 ~ 12084561 (+) True LOC122327174
XM_043223758.1 mRNA downstream 65529 12087165 ~ 12122997 (+) True p3h2
TU224831 other upstream 185868 11827344 ~ 11833374 (+) False LOC122327134
TU224828 other upstream 195187 11822934 ~ 11824055 (+) False LOC122327289
XR_006247707.1 other upstream 695302 11318689 ~ 11323940 (+) False mier2
TU224458 other upstream 1097314 10919060 ~ 10921928 (+) False si:dkey-172o19.2
TU224351 other upstream 1181877 10816135 ~ 10837365 (+) False G151620
TU224911 other downstream 26782 12048418 ~ 12263031 (+) False LOC122327127
TU224914 other downstream 217146 12238782 ~ 12265692 (+) False LOC122327127
TU225002 other downstream 271764 12293400 ~ 12294717 (+) True G152032
TU225014 other downstream 323570 12345206 ~ 12345750 (+) True G152043
TU225015 other downstream 323570 12345206 ~ 12345750 (+) False G152043

Expression Profile