RNA id: XR_006247779.1



Basic Information


Item Value
RNA id XR_006247779.1
length 119
RNA type rRNA
GC content 0.50
exon number 1
gene id LOC122328230
representative True

Chromosome Information


Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13967107 ~ 13967225 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTTACGgtcataccaccctgttcacacctgatctcgtctgatctcagaagctaagcagagttgggcctggttagtacttgaatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247772.1 lncRNA upstream 1295 13963124 ~ 13965812 (+) True LOC122328070
TU225953 lncRNA upstream 114671 13850304 ~ 13852436 (+) True LOC122327202
XR_006247620.1 lncRNA upstream 116147 13849135 ~ 13850960 (+) False LOC122327202
TU225966 lncRNA upstream 117534 13848734 ~ 13849573 (+) False LOC122327202
TU225965 lncRNA upstream 118496 13848132 ~ 13848611 (+) True G152653
TU226034 lncRNA downstream 25847 13993072 ~ 13999248 (+) True G152707
TU226035 lncRNA downstream 60266 14027491 ~ 14027914 (+) True G152708
TU226054 lncRNA downstream 108957 14076182 ~ 14078380 (+) False kcnip2
TU226060 lncRNA downstream 179545 14146770 ~ 14147192 (+) True G152725
TU226061 lncRNA downstream 179992 14147217 ~ 14147664 (+) True G152726
XM_043222319.1 mRNA upstream 418678 13541190 ~ 13548429 (+) True LOC122327135
XM_043222320.1 mRNA upstream 418678 13541190 ~ 13548429 (+) False LOC122327135
XM_043222321.1 mRNA upstream 418678 13541190 ~ 13548429 (+) False LOC122327135
XM_043223201.1 mRNA upstream 428081 13517128 ~ 13539026 (+) True LOC122327695
XM_043223200.1 mRNA upstream 460278 13502250 ~ 13506829 (+) True baiap2l2b
XM_043222432.1 mRNA downstream 73496 14040721 ~ 14058580 (+) True LOC122327219
XM_043222305.1 mRNA downstream 104251 14071476 ~ 14078374 (+) True kcnip2
XM_043222309.1 mRNA downstream 104251 14071476 ~ 14078374 (+) False kcnip2
XM_043222306.1 mRNA downstream 106228 14073453 ~ 14078374 (+) False kcnip2
XM_043222308.1 mRNA downstream 106570 14073795 ~ 14078374 (+) False kcnip2
TU225879 other upstream 285160 13575738 ~ 13681947 (+) True G152584
TU225846 other upstream 548700 13417464 ~ 13418407 (+) True G152565
TU225829 other upstream 583330 13383153 ~ 13383777 (+) True G152558
XR_006247608.1 other upstream 854374 13109819 ~ 13112733 (+) False LOC122327162
TU226044 other downstream 73499 14040724 ~ 14042521 (+) False LOC122327219
TU226124 other downstream 490924 14458149 ~ 14462660 (+) True G152767
TU226184 other downstream 719279 14686504 ~ 14691808 (+) True G152808
TU226683 other downstream 1245233 15212458 ~ 15216942 (+) False kif14
TU227010 other downstream 2037339 16004564 ~ 16035615 (+) True G153322

Expression Profile