RNA id: TU228724



Basic Information


Item Value
RNA id TU228724
length 513
lncRNA type inter_gene
GC content 0.77
exon number 2
gene id G154444
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2925010 ~ 2932237 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGGCCCTGGCCgccctggcctccttggccctggccgCCTGGCCTCCTTGGCCTGGCCgccctggcctccttggccctggcctCCCTGGCCgccctggcctccttggccctggccgccctggcctccttggccctggccgccctggcctccttggccGCCCTGGGCgccctggcctccttggccctggccgccctggcctccttggccGCCCTGGCCTCCTGCCCTCCTTGGCCGCCTGGCCTCCCCTGGCCTCCTGGCCCTGGCCCTGGCCgccctggcctccttggccttggccctggccgccctggcctccttggccttggccctggccgccctggcctccttggccttggccctggccgccctggcctccttggccttggccctggccgccctggcctccttggccttggccctggccgccctggcctccttggccTTGGCCTCCCTGACCCTGGCCCCCACCTTGACCCTGGCCCCCACCTTGACCCTGGCCCCCACCTTGACCCTGGC

Function


GO:

id name namespace
GO:0003006 developmental process involved in reproduction biological_process

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU228650 lncRNA downstream 24187 2900571 ~ 2900823 (-) True G154420
TU228643 lncRNA downstream 50254 2874472 ~ 2874756 (-) False si:zfos-905g2.1
TU228642 lncRNA downstream 56059 2867471 ~ 2868951 (-) True G154412
TU228632 lncRNA downstream 64828 2856588 ~ 2860182 (-) True G154406
TU228633 lncRNA downstream 71780 2852619 ~ 2853230 (-) True G154407
TU228720 lncRNA upstream 9167 2941404 ~ 2950658 (-) True G154443
TU228840 lncRNA upstream 64528 2996765 ~ 2997964 (-) True G154520
TU228839 lncRNA upstream 74246 3006483 ~ 3009478 (-) True G154519
TU228837 lncRNA upstream 75684 3007921 ~ 3009478 (-) False G154519
TU228838 lncRNA upstream 75684 3007921 ~ 3009478 (-) False G154519
XM_043224920.1 mRNA downstream 50252 2869618 ~ 2874758 (-) True si:zfos-905g2.1
XM_043224921.1 mRNA downstream 50256 2869618 ~ 2874754 (-) False si:zfos-905g2.1
XM_043224851.1 mRNA downstream 85969 2769482 ~ 2839041 (-) False LOC122328838
XM_043224864.1 mRNA upstream 82379 3014616 ~ 3062072 (-) False frmd4bb
XM_043224867.1 mRNA upstream 82379 3014616 ~ 3057384 (-) False frmd4bb
XM_043224866.1 mRNA upstream 82379 3014616 ~ 3057384 (-) False frmd4bb
XM_043224865.1 mRNA upstream 82379 3014616 ~ 3057384 (-) False frmd4bb
XM_043224863.1 mRNA upstream 82379 3014616 ~ 3057383 (-) True frmd4bb
XR_006247842.1 other downstream 126477 2787296 ~ 2798533 (-) True LOC122328849
XR_006247839.1 other downstream 142157 2771407 ~ 2782853 (-) False LOC122328838
XR_006247837.1 other downstream 808127 2102710 ~ 2116883 (-) False LOC122328833
TU228040 other downstream 1412719 1507885 ~ 1512291 (-) False smim29
TU228728 other upstream 10001 2942238 ~ 2951628 (-) False G154445
XR_006247838.1 other upstream 504542 3436779 ~ 3445964 (-) False LOC122328836
XR_006247897.1 other upstream 962729 3894966 ~ 3905892 (-) False lad1
XR_006247892.1 other upstream 1241677 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other upstream 1241677 4173914 ~ 4194996 (-) False LOC122329268

Expression Profile