RNA id: TU228728


Basic Information

Item Value
RNA id TU228728
length 367
RNA type TUCP
GC content 0.57
exon number 2
gene id G154445
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2925305 ~ 2951628 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tcaagcaATCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACTAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCTGCCAccctggcctccttggccctggcctccttggccctggcctccttggccctggcctccttggccctggccCTGACCCCCTTGGCCCTGACCCTGACCCCCTTGGCCCTGgccctggcctccttggccctggccctggcctcct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU228719 lncRNA downstream 3614 2924042 ~ 2938624 (-) True G154442
TU228714 lncRNA downstream 3614 2930783 ~ 2938624 (-) False G154442
TU228716 lncRNA downstream 3614 2930783 ~ 2938624 (-) False G154442
TU228718 lncRNA downstream 3614 2930783 ~ 2938624 (-) False G154442
TU228730 lncRNA downstream 9422 2925305 ~ 2932816 (-) False G154445
TU228840 lncRNA upstream 45137 2996765 ~ 2997964 (-) True G154520
TU228839 lncRNA upstream 54855 3006483 ~ 3009478 (-) True G154519
TU228837 lncRNA upstream 56293 3007921 ~ 3009478 (-) False G154519
TU228838 lncRNA upstream 56293 3007921 ~ 3009478 (-) False G154519
TU228845 lncRNA upstream 59791 3011419 ~ 3013181 (-) True G154525
XM_043224920.1 mRNA downstream 67480 2869618 ~ 2874758 (-) True si:zfos-905g2.1
XM_043224921.1 mRNA downstream 67484 2869618 ~ 2874754 (-) False si:zfos-905g2.1
XM_043224851.1 mRNA downstream 103197 2769482 ~ 2839041 (-) False LOC122328838
XM_043224864.1 mRNA upstream 62988 3014616 ~ 3062072 (-) False frmd4bb
XM_043224867.1 mRNA upstream 62988 3014616 ~ 3057384 (-) False frmd4bb
XM_043224866.1 mRNA upstream 62988 3014616 ~ 3057384 (-) False frmd4bb
XM_043224865.1 mRNA upstream 62988 3014616 ~ 3057384 (-) False frmd4bb
XM_043224863.1 mRNA upstream 62988 3014616 ~ 3057383 (-) True frmd4bb
XR_006247842.1 other downstream 143705 2787296 ~ 2798533 (-) True LOC122328849
XR_006247839.1 other downstream 159385 2771407 ~ 2782853 (-) False LOC122328838
XR_006247837.1 other downstream 825355 2102710 ~ 2116883 (-) False LOC122328833
TU228040 other downstream 1429947 1507885 ~ 1512291 (-) False smim29
XR_006247838.1 other upstream 485151 3436779 ~ 3445964 (-) False LOC122328836
XR_006247897.1 other upstream 943338 3894966 ~ 3905892 (-) False lad1
XR_006247892.1 other upstream 1222286 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other upstream 1222286 4173914 ~ 4194996 (-) False LOC122329268
TU229703 other upstream 1880190 4831818 ~ 4834520 (-) False LOC122329181

Expression Profile