RNA id: TU228730


Basic Information

Item Value
RNA id TU228730
length 382
lncRNA type inter_gene
GC content 0.60
exon number 4
gene id G154445
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2925305 ~ 2951628 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tcaagCAATCATCTTTATTTGAATGAAGGGGTGGGTTTACAGAATGAGGAAATGGGAATAGATTTCCACATGAAAAGATCTCCAGTGCATTGCAAAAAATGCCCAGAATCACAAGCTGGACCAAATACCTGGACACATTTCACAACTTCCCTAACCTCAGAACAATAAAAGACTTATTTACCTCCCGGCTGCCACCCTGTCCACCCCCCTGGCCCTGGCctccttggccctggcctccttggccctggcctccttggccctggcctccttggccctggccgCCTTGGCCCTGGCCGCCTTGGCCCTGGCCGCCTTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCTGGCCCTGGCCGCCCtggcctccttggccctggccgCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU228650 lncRNA downstream 24482 2900571 ~ 2900823 (-) True G154420
TU228643 lncRNA downstream 50549 2874472 ~ 2874756 (-) False si:zfos-905g2.1
TU228642 lncRNA downstream 56354 2867471 ~ 2868951 (-) True G154412
TU228632 lncRNA downstream 65123 2856588 ~ 2860182 (-) True G154406
TU228633 lncRNA downstream 72075 2852619 ~ 2853230 (-) True G154407
TU228720 lncRNA upstream 8588 2941404 ~ 2950658 (-) True G154443
TU228840 lncRNA upstream 63949 2996765 ~ 2997964 (-) True G154520
TU228839 lncRNA upstream 73667 3006483 ~ 3009478 (-) True G154519
TU228837 lncRNA upstream 75105 3007921 ~ 3009478 (-) False G154519
TU228838 lncRNA upstream 75105 3007921 ~ 3009478 (-) False G154519
XM_043224920.1 mRNA downstream 50547 2869618 ~ 2874758 (-) True si:zfos-905g2.1
XM_043224921.1 mRNA downstream 50551 2869618 ~ 2874754 (-) False si:zfos-905g2.1
XM_043224851.1 mRNA downstream 86264 2769482 ~ 2839041 (-) False LOC122328838
XM_043224864.1 mRNA upstream 81800 3014616 ~ 3062072 (-) False frmd4bb
XM_043224867.1 mRNA upstream 81800 3014616 ~ 3057384 (-) False frmd4bb
XM_043224866.1 mRNA upstream 81800 3014616 ~ 3057384 (-) False frmd4bb
XM_043224865.1 mRNA upstream 81800 3014616 ~ 3057384 (-) False frmd4bb
XM_043224863.1 mRNA upstream 81800 3014616 ~ 3057383 (-) True frmd4bb
XR_006247842.1 other downstream 126772 2787296 ~ 2798533 (-) True LOC122328849
XR_006247839.1 other downstream 142452 2771407 ~ 2782853 (-) False LOC122328838
XR_006247837.1 other downstream 808422 2102710 ~ 2116883 (-) False LOC122328833
TU228040 other downstream 1413014 1507885 ~ 1512291 (-) False smim29
TU228728 other upstream 9422 2942238 ~ 2951628 (-) False G154445
XR_006247838.1 other upstream 503963 3436779 ~ 3445964 (-) False LOC122328836
XR_006247897.1 other upstream 962150 3894966 ~ 3905892 (-) False lad1
XR_006247892.1 other upstream 1241098 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other upstream 1241098 4173914 ~ 4194996 (-) False LOC122329268

Expression Profile