RNA id: TU229052



Basic Information


Item Value
RNA id TU229052
length 681
RNA type TUCP
GC content 0.52
exon number 7
gene id ube2t
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3694652 ~ 3697022 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATTTAGCGGGCAGAATTGAAACCGCGCAAGTCTTTCGAAGGCGGTTTACTATCTAGTGAACGAGCTAAACTTGGCAGCAACAACATCAGCGGCCGTCATGCAGAGAGCGAGTCGCCTGAAGCGGGAGCTGCAGCTCCTCAGCGCCGAGCCTCCTCCGGGACTCTCCTGCTGGCAGACCGAGGGACGCCTGGATGAGCTGCGAGCCCAGATCGTCGGAGGTGCAAGCACTCCATATGAAGGAGGCGTGTTCACGCTGGAAATCAACATACCTGAGAGGTATCCGTTTGAACCTCCGAAGATGCGCTTTCTGACGCCCATCTATCACCCCAACATCGATAACGCAGGACGCATTTGTCTTGATGCTCTGAAACTGCCACCAAAGGGAGCTTGGAGGCCATCGCTCAATATTTCTACGGTGCTCACCTCCATACAGTTACTGATGACCGAACCAAACCCAGACGACCCGCTCATGGCTGATATATCCTCAGAATTTAAATACAACAAGGCGCTATATCTAGAAAAGGCGAAGAAATGGACGGCGGAACATGCAATCCAGAAGAATAAGGGATCTGTGGAGACGGAAGAACAGGCTCCtgagaacaaaaataagaaaaccgCATTGAAAAGAGAGGCGCTTACTGCACAGGAGAACTTAGAGGACACCAAGAAAGCTTGCATGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247817.1 lncRNA upstream 8544 3678763 ~ 3686108 (+) False LOC122328634
TU229049 lncRNA upstream 11872 3678719 ~ 3682780 (+) True LOC122328634
TU229041 lncRNA upstream 37247 3657099 ~ 3657405 (+) True G154673
TU229035 lncRNA upstream 53971 3639863 ~ 3640681 (+) True G154667
TU229029 lncRNA upstream 58375 3634764 ~ 3636277 (+) True G154661
TU229062 lncRNA downstream 2471 3699109 ~ 3728810 (+) True G154690
TU229074 lncRNA downstream 100716 3797354 ~ 3797927 (+) False G154698
TU229077 lncRNA downstream 100716 3797354 ~ 3798914 (+) False G154698
TU229071 lncRNA downstream 100836 3797474 ~ 3797927 (+) False G154698
TU229073 lncRNA downstream 100836 3797474 ~ 3799284 (+) True G154698
XM_043225373.1 mRNA upstream 671 3691282 ~ 3693981 (+) True LOC122329176
XM_043224434.1 mRNA upstream 21060 3669197 ~ 3673592 (+) False LOC122328631
XM_043224436.1 mRNA upstream 21060 3669328 ~ 3673592 (+) True LOC122328631
XM_043224433.1 mRNA upstream 21060 3669328 ~ 3673592 (+) False LOC122328631
XM_043224435.1 mRNA upstream 21060 3669328 ~ 3673592 (+) False LOC122328631
XM_043224008.1 mRNA downstream 567 3697205 ~ 3698961 (+) True LOC122328357
XM_043224236.1 mRNA downstream 120594 3817232 ~ 3826580 (+) True tulp1a
XM_043225089.1 mRNA downstream 131949 3828587 ~ 3854436 (+) True tead3a
XM_043225090.1 mRNA downstream 131949 3828587 ~ 3854436 (+) False tead3a
XM_043225091.1 mRNA downstream 131950 3828588 ~ 3854436 (+) False tead3a
XR_006247841.1 other upstream 685042 2995169 ~ 3009610 (+) False rbm10
XR_006247840.1 other upstream 685174 2995169 ~ 3009478 (+) False rbm10
TU228680 other upstream 737927 2948916 ~ 2956725 (+) False G154424
TU228663 other upstream 737927 2955085 ~ 2956725 (+) False G154424
TU228682 other upstream 743563 2948916 ~ 2951089 (+) True G154424
TU230095 other downstream 2895968 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230359 other downstream 3529356 7225994 ~ 7238919 (+) True G155561
TU230347 other downstream 3602641 7299279 ~ 7304358 (+) False tcea2
TU230667 other downstream 4635103 8331741 ~ 8333376 (+) False LOC122328506
TU230751 other downstream 4791448 8488086 ~ 8488641 (+) True G155799

Expression Profile