RNA id: TU229059



Basic Information


Item Value
RNA id TU229059
length 329
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G154687
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3692937 ~ 3693265 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CACCTGGTTTCATGACTCTGTGAATGGCTCTCGCTCCTGCTTTCAGATCCGGCCAGAAGTAATAACAGTTGCAGTGAAACACCTTGTCGACCGAGTTGTCCTCTACCGGCATGGTCAGCACATCGCTGTAATACAGCACGGCCTTTCCTCTGGAGATGTGCTCCTTCACACGCTTGCTGGCCATCTCGTGCATGTACCGAGAGAAATCCACGCCGAGCAGCTTCCCCTCCGGACCCGTGAGGAGCTGCGCCGCCGCCTGCAGACCGAACCCCGGCCCGTGACCGAGCTCCAGCACCGTGTCCTCGGGCTGAATGTTGCACAGTTTCACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU229056 lncRNA downstream 19356 3672679 ~ 3673581 (-) True G154684
TU229040 lncRNA downstream 36394 3656288 ~ 3656543 (-) True G154672
TU229039 lncRNA downstream 37341 3655286 ~ 3655596 (-) True G154671
TU229031 lncRNA downstream 59604 3632359 ~ 3633333 (-) True G154663
TU228997 lncRNA downstream 174820 3502275 ~ 3518117 (-) False tspan2b
TU229080 lncRNA upstream 104211 3797476 ~ 3798675 (-) True G154701
TU229081 lncRNA upstream 104725 3797990 ~ 3798969 (-) False G154701
TU229083 lncRNA upstream 113278 3806543 ~ 3806901 (-) True G154703
TU229092 lncRNA upstream 133562 3826827 ~ 3827190 (-) True G154708
TU229108 lncRNA upstream 144397 3837662 ~ 3838133 (-) True G154720
XM_043224432.1 mRNA downstream 4739 3682092 ~ 3688198 (-) True etv7
XM_043224437.1 mRNA downstream 10978 3674465 ~ 3681959 (-) True pnpla1
XM_043224198.1 mRNA downstream 138424 3529533 ~ 3554513 (-) True ngfa
XM_043225298.1 mRNA downstream 174795 3502265 ~ 3518142 (-) True tspan2b
XM_043224732.1 mRNA downstream 219483 3447559 ~ 3473454 (-) False uhrf1bp1
XM_043225547.1 mRNA upstream 8341 3701606 ~ 3770863 (-) True LOC122329314
XM_043224947.1 mRNA upstream 188755 3882020 ~ 3893676 (-) False tnnt2a
XM_043224946.1 mRNA upstream 188755 3882020 ~ 3893676 (-) True tnnt2a
XM_043225533.1 mRNA upstream 201701 3894966 ~ 3905892 (-) False lad1
XM_043225532.1 mRNA upstream 201701 3894966 ~ 3905892 (-) True lad1
XR_006247838.1 other downstream 246973 3436779 ~ 3445964 (-) False LOC122328836
TU228731 other downstream 735665 2925048 ~ 2957272 (-) True G154446
XR_006247897.1 other upstream 201701 3894966 ~ 3905892 (-) False lad1
XR_006247892.1 other upstream 480649 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other upstream 480649 4173914 ~ 4194996 (-) False LOC122329268
TU229703 other upstream 1138553 4831818 ~ 4834520 (-) False LOC122329181
TU229887 other upstream 1761152 5454417 ~ 5455047 (-) True G155227

Expression Profile