RNA id: TU229766



Basic Information


Item Value
RNA id TU229766
length 420
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G155153
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 5085142 ~ 5089097 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGAAATGAAGGGTTTCTTTCTTATGGTAACTGATCACTGTGCGTCAGTGGCAACAAAGACAACAACgatgatctcacacacacacactctctctctctctaactcaCACAAAGAGCTATAAATCTAGTTGTAAGGCCAATCACCTTCACAATGGCAGGGTCAGTGAAGGTCTCGTTTAAGATGTACATGACGTGAATTTAACTATCCTCATagaactattatttttaataaaacttcaGTGGTTCAGTGGGGTGGCTTTAATAAAACGTGAACGTGAGTGGCGTCGCAGTGTAAGACTCGTACCACTTTCTCAAGGATGGCATCGTTTGCGTCCACCACCAGGTCAAACCTGTCCTCCAGTCCAGTCAGTCTGTTCCTGTCTCTCATGTGAGACCTACAGCCATGATGCTGCATGATCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU229708 lncRNA downstream 142125 4908918 ~ 4943017 (-) False G155112
TU229707 lncRNA downstream 171155 4908918 ~ 4913987 (-) True G155112
TU229682 lncRNA downstream 354002 4727854 ~ 4731140 (-) True G155096
TU229678 lncRNA downstream 372060 4712689 ~ 4713082 (-) True G155093
TU229677 lncRNA downstream 374805 4707665 ~ 4710337 (-) True G155092
TU229769 lncRNA upstream 8586 5096532 ~ 5097130 (-) True G155156
TU229770 lncRNA upstream 23898 5111844 ~ 5112964 (-) True G155157
XR_006247896.1 lncRNA upstream 342600 5430546 ~ 5431524 (-) True LOC122329300
TU229897 lncRNA upstream 404785 5492731 ~ 5496474 (-) True LOC122329188
TU229905 lncRNA upstream 437095 5525041 ~ 5547708 (-) True G155238
XM_043224039.1 mRNA downstream 2147 5076353 ~ 5082995 (-) True gss
XM_043225309.1 mRNA downstream 108020 4928029 ~ 4977122 (-) True nkain4
XM_043225310.1 mRNA downstream 108024 4928029 ~ 4977118 (-) False nkain4
XM_043224426.1 mRNA downstream 164260 4914490 ~ 4920882 (-) False ddx23
XM_043224424.1 mRNA downstream 164260 4914490 ~ 4920882 (-) False ddx23
XM_043224046.1 mRNA upstream 5887 5093833 ~ 5110924 (-) False sla2b
XM_043224045.1 mRNA upstream 5887 5093833 ~ 5110447 (-) True sla2b
XM_043224040.1 mRNA upstream 26681 5114627 ~ 5153535 (-) True ndrg3b
XM_043224043.1 mRNA upstream 26681 5114627 ~ 5153534 (-) False ndrg3b
XM_043224044.1 mRNA upstream 26681 5114627 ~ 5131262 (-) False ndrg3b
TU229703 other downstream 250622 4831818 ~ 4834520 (-) False LOC122329181
XR_006247892.1 other downstream 890144 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other downstream 890146 4173914 ~ 4194996 (-) False LOC122329268
XR_006247897.1 other downstream 1179250 3894966 ~ 3905892 (-) False lad1
XR_006247838.1 other downstream 1639178 3436779 ~ 3445964 (-) False LOC122328836
TU229887 other upstream 366471 5454417 ~ 5455047 (-) True G155227
TU229892 other upstream 389968 5477914 ~ 5479819 (-) False LOC122329286
TU230261 other upstream 1642905 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 1678662 6766608 ~ 6822978 (-) False rps21
TU230273 other upstream 1685632 6773578 ~ 6822978 (-) False rps21

Expression Profile