RNA id: TU229769



Basic Information


Item Value
RNA id TU229769
length 250
lncRNA type intronic
GC content 0.30
exon number 2
gene id G155156
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 5096532 ~ 5097130 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cacgcatatacatACTtacgcatgcatgcatacatacatatatatatatatatatatatacatatacgcatgcatacatatacacatacatacacgcatatatatatacatacatgtacatatacatacgtaCACATGCATacgcatgcatacatatacatatatatacacatatatacgcatacacacacacatatacatacatacgcatgcatacatacacgcatatatatatacacatacatatgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU229765 lncRNA downstream 7435 5087348 ~ 5089097 (-) True G155153
TU229766 lncRNA downstream 8586 5085142 ~ 5087946 (-) False G155153
TU229708 lncRNA downstream 153515 4908918 ~ 4943017 (-) False G155112
TU229707 lncRNA downstream 182545 4908918 ~ 4913987 (-) True G155112
TU229682 lncRNA downstream 365392 4727854 ~ 4731140 (-) True G155096
TU229770 lncRNA upstream 14714 5111844 ~ 5112964 (-) True G155157
XR_006247896.1 lncRNA upstream 333416 5430546 ~ 5431524 (-) True LOC122329300
TU229897 lncRNA upstream 395601 5492731 ~ 5496474 (-) True LOC122329188
TU229905 lncRNA upstream 427911 5525041 ~ 5547708 (-) True G155238
XR_006247895.1 lncRNA upstream 556888 5654018 ~ 5662956 (-) True LOC122329299
XM_043224039.1 mRNA downstream 13537 5076353 ~ 5082995 (-) True gss
XM_043225309.1 mRNA downstream 119410 4928029 ~ 4977122 (-) True nkain4
XM_043225310.1 mRNA downstream 119414 4928029 ~ 4977118 (-) False nkain4
XM_043224424.1 mRNA downstream 175650 4914490 ~ 4920882 (-) False ddx23
XM_043224040.1 mRNA upstream 17497 5114627 ~ 5153535 (-) True ndrg3b
XM_043224043.1 mRNA upstream 17497 5114627 ~ 5153534 (-) False ndrg3b
XM_043224044.1 mRNA upstream 17497 5114627 ~ 5131262 (-) False ndrg3b
XM_043224034.1 mRNA upstream 56831 5153961 ~ 5169328 (-) False phf20b
XM_043224033.1 mRNA upstream 56831 5153961 ~ 5169328 (-) False phf20b
TU229703 other downstream 262012 4831818 ~ 4834520 (-) False LOC122329181
XR_006247892.1 other downstream 901534 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other downstream 901536 4173914 ~ 4194996 (-) False LOC122329268
XR_006247897.1 other downstream 1190640 3894966 ~ 3905892 (-) False lad1
XR_006247838.1 other downstream 1650568 3436779 ~ 3445964 (-) False LOC122328836
TU229887 other upstream 357287 5454417 ~ 5455047 (-) True G155227
TU229892 other upstream 380784 5477914 ~ 5479819 (-) False LOC122329286
TU230261 other upstream 1633721 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 1669478 6766608 ~ 6822978 (-) False rps21
TU230273 other upstream 1676448 6773578 ~ 6822978 (-) False rps21

Expression Profile