RNA id: TU230195



Basic Information


Item Value
RNA id TU230195
length 510
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G155435
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6611993 ~ 6612524 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTTCATTTTCTGCAAAGCAAACTTCAGCAAGTAGGACAGCTGCTCCAGGTTCAGCATGGTCATAGCTTTACTCTGAGTCTCTATGCACTCAGCCACCGTTATTTTCTGAAGCAGAGAGCGAAATGACtactatattaataaatcacaagCATTACAGTTCATAATCATTCATGTATCCCCAAACAGTCTCAAGTGACCGGTGATTCAGTTACAGTCTATTTAACTTcatataatgaaaatgtatataggTGTAAAAACGCATTTTTGAATAAACTGATTTgtatttaagattttaaacaaatttgttaaaatgttagcAAGGTTAACTGTTATCAGAGCAAATACCTAAACCCATACATAACACATTCAACCCGTTTAACTAGTTTCTTAATGGTCTAGTTGATTCTAGTCCAAACGGAAGCTTAAAACTCTGAAGTAAGGAGTAGTGAAGCACATTTATGTCACACTTCCAGAAACGAGTAAGCTTGTGTCTACTGCCTAGACAGCGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230127 lncRNA downstream 97900 6509715 ~ 6514093 (-) True G155392
TU230121 lncRNA downstream 112244 6488624 ~ 6499749 (-) False G155391
TU230119 lncRNA downstream 123149 6485439 ~ 6488844 (-) True G155391
TU230159 lncRNA downstream 127078 6484654 ~ 6484915 (-) True G155413
TU230114 lncRNA downstream 260168 6349007 ~ 6351825 (-) True G155388
TU230208 lncRNA upstream 11895 6624419 ~ 6625268 (-) True G155443
XR_006247875.1 lncRNA upstream 181579 6794103 ~ 6804919 (-) True LOC122328996
TU230288 lncRNA upstream 222851 6835375 ~ 6835589 (-) True G155508
TU230378 lncRNA upstream 224605 6837129 ~ 6838566 (-) True G155578
TU230388 lncRNA upstream 317162 6929686 ~ 7067824 (-) True G155586
XM_043224003.1 mRNA downstream 9910 6598718 ~ 6602083 (-) True slc16a7
XM_043224004.1 mRNA downstream 9921 6598718 ~ 6602072 (-) False slc16a7
XM_043224005.1 mRNA downstream 9930 6598718 ~ 6602063 (-) False slc16a7
XM_043225070.1 mRNA downstream 90149 6515811 ~ 6521844 (-) True zgc:171775
XM_043224781.1 mRNA downstream 154074 6454153 ~ 6457919 (-) True krt18a.1
XM_043224770.1 mRNA upstream 96188 6708712 ~ 6713207 (-) True adrm1
XM_043224772.1 mRNA upstream 96188 6708712 ~ 6712695 (-) False adrm1
XM_043224771.1 mRNA upstream 96188 6708712 ~ 6712695 (-) False adrm1
XM_043224768.1 mRNA upstream 96188 6708712 ~ 6712695 (-) False adrm1
XM_043224769.1 mRNA upstream 96188 6708712 ~ 6712684 (-) False adrm1
TU229892 other downstream 1132174 5477914 ~ 5479819 (-) False LOC122329286
TU229887 other downstream 1156946 5454417 ~ 5455047 (-) True G155227
TU229703 other downstream 1777473 4831818 ~ 4834520 (-) False LOC122329181
XR_006247892.1 other downstream 2416995 4173914 ~ 4194998 (-) True LOC122329268
TU230261 other upstream 118327 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 154084 6766608 ~ 6822978 (-) False rps21
TU230273 other upstream 161054 6773578 ~ 6822978 (-) False rps21
TU230275 other upstream 161054 6773578 ~ 6822978 (-) False rps21
TU230277 other upstream 161054 6773578 ~ 6822978 (-) False rps21

Expression Profile