RNA id: TU230446



Basic Information


Item Value
RNA id TU230446
length 374
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G155624
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7460929 ~ 7461302 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAAAAGTCATGCAGTGTACTATTACCAAACCTATAACCCACAACTCctcattttattatgaataatattaatacataacaATACAGTATATAACACAAGTTCCATCCTGTTTTCCATTAATTTATGAGGTTGCATCCTGTTTTGCCCTGTCGGCTTACCTGATGATGACGTACATGACCAAGCAGTTTCCCACCAGCCCCACCACACAGACGATCATGTAGACCACTGCTATAGTGATCTTGACGCCCCTTGGGAAGAAGCTGTCAGTCTCGTTGAAGGCGCTGAAGTTGTTCTGGAACAGGGACTCGTTGTAGAGATGGAAGTGTCTGGGGTCAGCAAAGCCGATGGAATCATTTGGGAACTCCATGACTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230445 lncRNA downstream 1149 7459531 ~ 7459780 (-) True G155623
TU230442 lncRNA downstream 59737 7400981 ~ 7401192 (-) True G155620
TU230416 lncRNA downstream 155365 7124828 ~ 7305564 (-) True G155607
TU230413 lncRNA downstream 159793 7120403 ~ 7301136 (-) True G155605
TU230414 lncRNA downstream 336343 7122929 ~ 7124586 (-) True G155606
TU230449 lncRNA upstream 18193 7479495 ~ 7480570 (-) True G155627
TU230450 lncRNA upstream 20725 7482027 ~ 7482492 (-) True G155628
TU230451 lncRNA upstream 22621 7483923 ~ 7484205 (-) True G155629
TU230545 lncRNA upstream 304946 7766248 ~ 7817371 (-) True G155670
TU230540 lncRNA upstream 358444 7819746 ~ 7852251 (-) True G155669
XM_043225082.1 mRNA downstream 118230 7310570 ~ 7342699 (-) False rgs19
XM_043225083.1 mRNA downstream 118324 7310570 ~ 7342605 (-) False rgs19
XM_043225085.1 mRNA downstream 118371 7310570 ~ 7342558 (-) False rgs19
XM_043225084.1 mRNA downstream 118398 7310570 ~ 7342531 (-) True rgs19
XM_043225086.1 mRNA downstream 119392 7310570 ~ 7341537 (-) False rgs19
XM_043224185.1 mRNA upstream 60762 7522064 ~ 7525501 (-) True npbwr2b
XM_043224442.1 mRNA upstream 312999 7774301 ~ 7782717 (-) True kif3b
XM_043224007.1 mRNA upstream 323003 7784305 ~ 7788287 (-) True LOC122328356
XM_043224571.1 mRNA upstream 360820 7822122 ~ 7832584 (-) True LOC122328712
XM_043225053.1 mRNA upstream 393002 7854304 ~ 7861354 (-) True LOC122328943
TU230401 other downstream 182606 7276448 ~ 7278323 (-) True G155596
TU230379 other downstream 457442 7000585 ~ 7003487 (-) False LOC122329304
TU230386 other downstream 464120 6994181 ~ 6996809 (-) False LOC122329304
TU230394 other downstream 479140 6966827 ~ 6981789 (-) False LOC122328436
TU230380 other downstream 593648 6864425 ~ 6867281 (-) False ccm2l
unassigned_transcript_2580 other upstream 724595 8185897 ~ 8185988 (-) True trnai-uau_5
unassigned_transcript_2581 other upstream 724893 8186195 ~ 8186288 (-) True trnai-uau_6
unassigned_transcript_2582 other upstream 725515 8186817 ~ 8186910 (-) True trnai-uau_7
unassigned_transcript_2583 other upstream 725815 8187117 ~ 8187210 (-) True trnai-uau_8
unassigned_transcript_2584 other upstream 727511 8188813 ~ 8188906 (-) True trnai-uau_9

Expression Profile