RNA id: TU230819



Basic Information


Item Value
RNA id TU230819
length 753
lncRNA type sense_over
GC content 0.35
exon number 2
gene id G155850
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8821438 ~ 8939706 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGGGGGGGGgaggagggagggaggagggaGGAAGGGGACAGTTGGTGTTTAGGAACTGAAAGTTCATTTGCCGGAGAGGAGAACAGAGCCACAGGTCTACATACAAGAGAAACCGTCAAGAACCACAAAGATTTAGAAGTGTTAACACACTTGGTACGTTGTAAAGGTAGACAGAGAGAAGTGAGCGCCATCTCGTTCAGTTCTTCATCAGACTGGACCGTCTCCTCGCCAGCTTTGATCTGTAGGAAACCACGGAGTCGGGTGAGCAGAGAACATGTCGAGGGAAAACACACTCAACTGATAAGTATTTAGATACTTAAGAAACAAAATCAGTTTTCTGATTTCAAAATcttctaatatatattatatagctaactacatttcttaaaaaaatattgaaaataataattcagtgacactttataataaggttcattagttaacactggttaacaacattagtaaacttgaactaagaatgaacaatacttctacagcatttattaatctcagtttatgttattttcattattaaaagttaattaatgCACCATTAACTaccataaataaacaatgaacaacagtattttcatatttcaactAACATTAACGAAGATTAATAAATCGCACAATAAATGCACTgctcattgtttgttcatgttagttaatatatatatgaatcaaTTACCACAatcagtgtgtgtatttgtgtacgTTTTGACTTTAGGATACCAAGTTAAACtacatgaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247812.1 lncRNA upstream 200192 8698178 ~ 8700822 (+) True LOC122328608
TU230793 lncRNA upstream 209914 8690885 ~ 8691100 (+) True G155830
TU230792 lncRNA upstream 271949 8628793 ~ 8629065 (+) True G155829
TU230785 lncRNA upstream 275378 8624905 ~ 8625636 (+) True G155824
TU230784 lncRNA upstream 276225 8624130 ~ 8624789 (+) True G155823
TU230841 lncRNA downstream 3064 8941031 ~ 9033098 (+) False lzic
TU230880 lncRNA downstream 67075 9005042 ~ 9006738 (+) True G155894
TU230844 lncRNA downstream 78300 9016267 ~ 9101372 (+) False lzic
TU230845 lncRNA downstream 91562 9029529 ~ 9081482 (+) False lzic
TU230853 lncRNA downstream 190733 9128700 ~ 9131075 (+) True G155868
XM_043224775.1 mRNA upstream 211181 8629204 ~ 8689833 (+) True pex14
XM_043225409.1 mRNA upstream 547104 8351800 ~ 8353910 (+) True LOC122329212
XM_043224457.1 mRNA upstream 559235 8334954 ~ 8341779 (+) True LOC122328648
XM_043224221.1 mRNA downstream 88518 9026485 ~ 9029201 (+) False lzic
XM_043224073.1 mRNA downstream 207053 9145020 ~ 9147322 (+) True aurkaip1
XM_043225439.1 mRNA downstream 209956 9147923 ~ 9155012 (+) True mxra8b
XM_043224733.1 mRNA downstream 218527 9156494 ~ 9186875 (+) True dvl1a
XM_043224734.1 mRNA downstream 218527 9156494 ~ 9186875 (+) False dvl1a
TU230751 other upstream 412373 8488086 ~ 8488641 (+) True G155799
TU230667 other upstream 567638 8331741 ~ 8333376 (+) False LOC122328506
TU230347 other upstream 1596656 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 1662095 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 2306279 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230843 other downstream 88541 9026508 ~ 9033098 (+) True lzic
TU230931 other downstream 182917 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 182917 9120884 ~ 9122393 (+) True G155927
TU231143 other downstream 786251 9724218 ~ 9769620 (+) False G156081
TU231144 other downstream 786251 9724218 ~ 9769620 (+) False G156081

Expression Profile