RNA id: TU231143


Basic Information

Item Value
RNA id TU231143
length 1509
RNA type TUCP
GC content 0.45
exon number 2
gene id G156081
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9683746 ~ 9769620 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

acacacacacacacacacacacacacacacacacacacagtgGTCATGGGTAGATATGCTGCTTACTAATCTTTATCCCAGCAACAGATCAATAACACGTTTGTACTGGATGAATCAATGCGCTGAAGcatcaaacacactctctcacacaaactGGGGAGTACAAAGGAGCCAAAATGTATTGAATGTATGAAAAGGCACAAGGTATtgctaattatataaaaacatgcgTGAATTACCACTGCCACTGATCTCGACTCGCAGAGAAAGACGTTAAAAAGACAACACGCGATTTATGAGGTCCTTCTCTGCACTCCACTACAGCTTTTCACCCACTTACACAATGATctgttaaaaatagattttttttaacaagtgtTTGATTTGTTGCCCTTAGCAACAACAGTGtaaaaacaatgcataaaaTTAACAGTTTAAAGAAATGAGACAGAGTAAAAGCTCAAGTTAtaccacactcacacacactcaaacgtCCTCAAATAAGTGCTTTCTTGAGAGATGAAATCAGGTATTTGGATTCATAAGACTGTATAGGTACCTTTCTTCACTGGCATTCAAATAGTGCATATGAAAATCAGTATTTAACTGCATTTGTGATTTTCTGTGGAAGAAAATGTATAAGGTGGGGGGATTCAAAGGGCCGTGACTCTTGAAGTCACCAAAAGAGTCAAAGATTCAAAATGTGAGAATCGATTTAGAGAGTCAGAATGAAAGATTCAGATAATCATGACAGTCTGATAGCAGCAGGAATGGTTCCCCCTCCCCAATGGGGTGAGGATAAGGGGTTGTGTCGCATAGGACATGCAAAGTTGGCATTGTTACCAGCCGATAAGGTTGGCTTTGGCCTTCTCTGTGAGCTTACGGACTCTCCCTTTGCTTGACGTGCCGAAAGTAATAGAGGCATCCTCAAACAAAAGCTGTCTTTGCTCTTCCTCAGAGTCTTCTTCGTTATAGAAAGCTGTCCTTCGGCCTTGGTTACGTGTTCTCATCTGCCCTTTCGAGCTCCCATCCTCTCCCATATAAATGTCAGGCTCTTCCCTTTGGGCAGGGCCTGGCGTAGGGGGCGTGGTTTCTTCGTTTCCACGGCGACTGCTCCTTCTGAGAGCTTTGGGGCTTGAAGGAGCCGGGGTATCCGGCATCCGGATAACTCGGGGTCTACCTCGTGGTTTGGGACACTCTGGAGTCACTACCCCTGAATCTGAAAGACTACTGTCCTGGGCTGTAGAAGATGCCCCGCCCTCATCACCAGTAGacagaagctcctcctcatggGAGGAGCTTCTTCGGAGAGACTCCAactcttttttgcttttcctccctctcttttttccaGAGGCCTGGGGCAGTGGGGGCGGCAGTACCGCTACTGGCGTCCGTATTTGTGCGTCTAATCTGGGTCGGCCCCGGCCTCTTCGTACCACTCCCAGAGTCACTTGACTATGACCATTCAAATGCAAACTATTTTGAGGAGAAGAGTTGTGATCAACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231094 lncRNA upstream 84392 9622479 ~ 9639826 (+) True G156047
TU231076 lncRNA upstream 139638 9584169 ~ 9584580 (+) True G156034
TU231010 lncRNA upstream 509764 9214140 ~ 9214454 (+) True G155985
TU231009 lncRNA upstream 510511 9213155 ~ 9213707 (+) True G155984
TU230837 lncRNA upstream 586028 9135416 ~ 9138190 (+) True G155860
TU231166 lncRNA downstream 33076 9802696 ~ 9808280 (+) True G156096
TU231169 lncRNA downstream 43597 9813217 ~ 9815309 (+) True G156098
TU231180 lncRNA downstream 111142 9880762 ~ 9973534 (+) True G156109
XR_006247821.1 lncRNA downstream 115425 9885045 ~ 9888379 (+) True LOC122328703
TU231179 lncRNA downstream 152521 9922141 ~ 9923225 (+) True G156108
XM_043224514.1 mRNA upstream 18534 9696640 ~ 9705684 (+) True tbx18
XM_043224522.1 mRNA upstream 64733 9649897 ~ 9659485 (+) True selenoi
XM_043224465.1 mRNA upstream 75749 9635094 ~ 9648469 (+) True si:ch211-197l9.2
XM_043224516.1 mRNA upstream 108722 9601928 ~ 9615496 (+) True cables2a
XM_043224517.1 mRNA upstream 108722 9601928 ~ 9615496 (+) False cables2a
XM_043224549.1 mRNA downstream 53189 9822809 ~ 9830190 (+) True sh3bgrl2
XM_043224547.1 mRNA downstream 64704 9834324 ~ 9837182 (+) True rps12
XM_043224542.1 mRNA downstream 134603 9904223 ~ 9908862 (+) True tbpl1
XM_043224489.1 mRNA downstream 226177 9995797 ~ 10005646 (+) False myb
XM_043224488.1 mRNA downstream 226178 9995798 ~ 10005646 (+) True myb
TU230934 other upstream 601825 9120884 ~ 9122393 (+) True G155927
TU230931 other upstream 601844 9120884 ~ 9122374 (+) False G155927
TU230843 other upstream 691120 9026508 ~ 9033098 (+) True lzic
TU230751 other upstream 1235577 8488086 ~ 8488641 (+) True G155799
TU230667 other upstream 1390842 8331741 ~ 8333376 (+) False LOC122328506
XR_006247904.1 other downstream 65476 9835096 ~ 9835170 (+) True LOC122329334
XR_006247902.1 other downstream 65775 9835395 ~ 9835479 (+) True LOC122329332
TU231564 other downstream 646051 10415671 ~ 10417898 (+) False LOC122328383
TU231621 other downstream 781477 10551097 ~ 10554720 (+) True LOC122329061
TU231625 other downstream 793724 10563344 ~ 10572246 (+) True G156399

Expression Profile