RNA id: TU231365


Basic Information

Item Value
RNA id TU231365
length 482
lncRNA type read_through
GC content 0.41
exon number 4
gene id G156235
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9678261 ~ 9815494 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tagcttttttttaatatttgctTTGTTCTAAAGCGCCTCAGTCCAATATTCTGATGCttaatgcaatgacattcatatatttatggCATTTCTCATATGTTCAAGTGCTTTTGATGCCACACTTTGATGCTCCTTCAAACCACTATTGACAGAGTTATTAATATAGTTATTAATCGGCGATTCATTGCCTCACCATCTCTACACTCTCCCTGTAGTTTCATCTAGCCCAGAGAGCAGGCCTCTTTCTCTGTATTAGCTGAACTCATTGAATTACTGTGGAACTGCTCGTTTCATTAGCAGAGAGGACTTTGTTTTTGCCCGATCACATTGAAACACTGTGTTTGATATTTCCCGTTCTGATGCATCGACTCGGCTTCAGGGCAGCGAATCACACAAGAGGCAGTGTGCATGTCGTATTCTGTGTTTTGAATGTGCcttgactttttgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231109 lncRNA downstream 65665 9612250 ~ 9612596 (-) True G156056
TU231107 lncRNA downstream 70313 9607488 ~ 9607948 (-) True G156054
TU231104 lncRNA downstream 75784 9601962 ~ 9602477 (-) True G156051
TU231000 lncRNA downstream 489364 9188513 ~ 9188897 (-) True G155979
TU230983 lncRNA downstream 524759 9153080 ~ 9153502 (-) True G155968
XR_006247820.1 lncRNA upstream 52426 9867920 ~ 9877168 (-) True LOC122328702
TU231404 lncRNA upstream 135649 9951143 ~ 9952031 (-) True G156261
TU231407 lncRNA upstream 200962 10016456 ~ 10017421 (-) True G156264
TU231431 lncRNA upstream 237032 10052526 ~ 10053549 (-) True G156278
TU231439 lncRNA upstream 242517 10058011 ~ 10059303 (-) True G156283
XM_043224479.1 mRNA downstream 3624 9662413 ~ 9674637 (-) True LOC122328660
XM_043224520.1 mRNA downstream 44894 9622453 ~ 9633367 (-) True osbpl2a
XM_043224521.1 mRNA downstream 56389 9615533 ~ 9621872 (-) True LOC122328677
XM_043223962.1 mRNA downstream 116138 9549124 ~ 9562123 (-) True myt1a
XM_043224327.1 mRNA downstream 129919 9543486 ~ 9548342 (-) True pcmtd2a
XM_043224553.1 mRNA upstream 16315 9831809 ~ 9833648 (-) True zgc:153284
XM_043224495.1 mRNA upstream 21941 9837435 ~ 9865787 (-) False eya4
XM_043224492.1 mRNA upstream 21941 9837435 ~ 9865787 (-) True eya4
XM_043224497.1 mRNA upstream 21941 9837435 ~ 9865786 (-) False eya4
XM_043224493.1 mRNA upstream 21941 9837435 ~ 9865786 (-) False eya4
XR_006247818.1 other downstream 468297 9196227 ~ 9209964 (-) False ccdc187
TU230970 other downstream 751651 8921564 ~ 8926610 (-) True sst6
XR_006247823.1 other downstream 758536 8913062 ~ 8919725 (-) False c23h1orf127
XR_006247824.1 other downstream 758536 8913063 ~ 8919725 (-) False c23h1orf127
TU230789 other downstream 1049870 8625758 ~ 8628391 (-) True G155827
TU231375 other upstream 16634 9832128 ~ 9833633 (-) False zgc:153284
TU231376 other upstream 16634 9832128 ~ 9833682 (-) False zgc:153284
TU231501 other upstream 415052 10230546 ~ 10231919 (-) False ankrd52a
TU231517 other upstream 421602 10237096 ~ 10239273 (-) False ankrd52a
TU231532 other upstream 550049 10365543 ~ 10367369 (-) False LOC122328779

Expression Profile