RNA id: TU231404



Basic Information


Item Value
RNA id TU231404
length 765
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G156261
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9951143 ~ 9952031 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


agacagagagaggacagCCTGTCTCCTCCTGCATTTGTCCCTCAGGGTGGAGGGAACCGGCTGACTTACCGTCTCTTCAGCCCCCTTAACAAGCACAGCATTCCCCCTAAACGCAGGTTACACAAGGATCTTCACCAGCAGTGATTCACGCTGatgATATTTTGCAGATTAAAATATAAGACGACAGCCAGACCAAAAAGGAGGCATGGAGGAATAAAAGAGAAGACGGCCTAACAAATAGAGctatactatttttaaaagatagCTGTTGGTGaagttttctgaaatgttttgtgaatttgAAGATGGGAGATAATTAAAAGATGCTGTCACTGCCAATGAATGTATTTGGAATTGGAagtgataaacaaacaaaacattcacTTTATCACAGCCTCTAATCtagttttcagaattttttatgttttatgggGAGTAGGCAGTGTGACGCAATGCCATTTCAGGtcaatttatatgaattatttgtGCTACCTGGTTGAAATGTATTCCAGAGAAGTGGCGTGTTTCAGCAGATCAAAttgaattcagttttttcttgAAGTACCAAggacacacatttatacatatataaatttggGTTCAGAAATGAAGTTCACTGCTTTTTGGTCTTAATTCAGGCCACcaaaatgtcatatttcattGTGCGGCTTTATTAAGCATGAAAATGCCAAACATAAAattgctgctgttgttttctcaCCCTAATGCTATTCTGAAAAATGAGCTATCAGGCTCCAAAAAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006247820.1 lncRNA downstream 73975 9867920 ~ 9877168 (-) True LOC122328702
TU231378 lncRNA downstream 120018 9782108 ~ 9831125 (-) True G156245
TU231365 lncRNA downstream 135649 9678261 ~ 9815494 (-) True G156235
TU231109 lncRNA downstream 338547 9612250 ~ 9612596 (-) True G156056
TU231107 lncRNA downstream 343195 9607488 ~ 9607948 (-) True G156054
TU231407 lncRNA upstream 64425 10016456 ~ 10017421 (-) True G156264
TU231431 lncRNA upstream 100495 10052526 ~ 10053549 (-) True G156278
TU231439 lncRNA upstream 105980 10058011 ~ 10059303 (-) True G156283
TU231491 lncRNA upstream 160586 10112617 ~ 10115673 (-) False G156313
TU231490 lncRNA upstream 162066 10114097 ~ 10116955 (-) True G156313
XM_043224507.1 mRNA downstream 10135 9920047 ~ 9941008 (-) True sgk1
XM_043224510.1 mRNA downstream 24973 9920047 ~ 9926170 (-) False sgk1
XM_043224509.1 mRNA downstream 24975 9920047 ~ 9926168 (-) False sgk1
XM_043224511.1 mRNA downstream 25191 9920047 ~ 9925952 (-) False sgk1
XM_043224508.1 mRNA downstream 26604 9920047 ~ 9924539 (-) False sgk1
XM_043224518.1 mRNA upstream 10963 9962994 ~ 9968091 (-) True aldh8a1
XM_043224485.1 mRNA upstream 19471 9971502 ~ 9994574 (-) False hbs1l
XM_043224484.1 mRNA upstream 19471 9971502 ~ 9991999 (-) True hbs1l
XM_043224487.1 mRNA upstream 34475 9986506 ~ 9992002 (-) False hbs1l
XM_043224534.1 mRNA upstream 80506 10032537 ~ 10037756 (-) False mtfr2
TU231376 other downstream 117461 9832128 ~ 9833682 (-) False zgc:153284
TU231375 other downstream 117510 9832128 ~ 9833633 (-) False zgc:153284
TU231374 other downstream 142774 9801785 ~ 9808369 (-) True hmgn3
TU231373 other downstream 142911 9801785 ~ 9808232 (-) False hmgn3
XR_006247818.1 other downstream 741179 9196227 ~ 9209964 (-) False ccdc187
TU231501 other upstream 278515 10230546 ~ 10231919 (-) False ankrd52a
TU231517 other upstream 285065 10237096 ~ 10239273 (-) False ankrd52a
TU231532 other upstream 413512 10365543 ~ 10367369 (-) False LOC122328779
TU231697 other upstream 723653 10675684 ~ 10678049 (-) False LOC122328798
TU232124 other upstream 1148713 11100744 ~ 11105223 (-) True G156746

Expression Profile