Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043224137.1 |
| length | 1231 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 6 |
| gene id | LOC122328447 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 10514979 ~ 10518751 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU231277 | lncRNA | upstream | 126359 | 10387868 ~ 10388626 (+) | True | G156171 |
| TU231275 | lncRNA | upstream | 127485 | 10386960 ~ 10387500 (+) | True | G156169 |
| TU231342 | lncRNA | upstream | 168931 | 10263990 ~ 10346054 (+) | True | G156217 |
| TU231344 | lncRNA | upstream | 179760 | 10329851 ~ 10335225 (+) | False | LOC122328781 |
| XR_006247831.1 | lncRNA | upstream | 258579 | 10254786 ~ 10256406 (+) | True | LOC122328771 |
| TU231605 | lncRNA | downstream | 2999 | 10520142 ~ 10520767 (+) | True | G156387 |
| TU231628 | lncRNA | downstream | 56071 | 10573214 ~ 10655710 (+) | True | G156401 |
| TU231624 | lncRNA | downstream | 149718 | 10666861 ~ 10674148 (+) | True | G156398 |
| TU231640 | lncRNA | downstream | 179159 | 10696302 ~ 10696558 (+) | True | G156413 |
| TU231643 | lncRNA | downstream | 181655 | 10698798 ~ 10700895 (+) | True | G156414 |
| XM_043225421.1 | mRNA | upstream | 65654 | 10447808 ~ 10449331 (+) | False | LOC122329231 |
| XM_043225422.1 | mRNA | upstream | 65654 | 10447813 ~ 10449331 (+) | True | LOC122329231 |
| XM_043224362.1 | mRNA | upstream | 82482 | 10429277 ~ 10432503 (+) | True | LOC122328600 |
| XM_043224363.1 | mRNA | upstream | 82482 | 10429277 ~ 10432503 (+) | False | LOC122328600 |
| XM_043224055.1 | mRNA | upstream | 87823 | 10415663 ~ 10427162 (+) | True | LOC122328383 |
| XM_043225266.1 | mRNA | downstream | 33961 | 10551104 ~ 10554012 (+) | False | LOC122329061 |
| XM_043224618.1 | mRNA | downstream | 38133 | 10555276 ~ 10566657 (+) | True | LOC122328734 |
| XM_043224311.1 | mRNA | downstream | 129820 | 10646963 ~ 10658747 (+) | True | LOC122328564 |
| XM_043223977.1 | mRNA | downstream | 248719 | 10765862 ~ 10772199 (+) | True | commd7 |
| XM_043225170.1 | mRNA | downstream | 269741 | 10786884 ~ 10870751 (+) | True | nol4lb |
| TU231564 | other | upstream | 97087 | 10415671 ~ 10417898 (+) | False | LOC122328383 |
| XR_006247902.1 | other | upstream | 679506 | 9835395 ~ 9835479 (+) | True | LOC122329332 |
| XR_006247904.1 | other | upstream | 679815 | 9835096 ~ 9835170 (+) | True | LOC122329334 |
| TU231144 | other | upstream | 745365 | 9724218 ~ 9769620 (+) | False | G156081 |
| TU231621 | other | downstream | 33954 | 10551097 ~ 10554720 (+) | True | LOC122329061 |
| TU231625 | other | downstream | 46201 | 10563344 ~ 10572246 (+) | True | G156399 |
| TU231641 | other | downstream | 181784 | 10698927 ~ 10700895 (+) | False | G156414 |
| unassigned_transcript_2617 | other | downstream | 384926 | 10902069 ~ 10902140 (+) | True | trnae-cuc_40 |
| TU231770 | other | downstream | 396761 | 10913904 ~ 10923988 (+) | True | G156497 |
