RNA id: TU231641



Basic Information


Item Value
RNA id TU231641
length 691
RNA type TUCP
GC content 0.48
exon number 5
gene id G156414
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10698798 ~ 10700895 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACAGCTGACAGCTGATTTCTCCTTGGCTGTAGGAGGAAACCACAATCTTCAGTACTTTTGGTTTGCGTCCCAAGGGAATACGTTCGGGTTTTGGCTAGAGTCATGGTCCAGACCCGGAAACATGTTTcatgaaagacaaaaatgtaaaaaaacaagagCGGGTCAGTCAGAGAGCGGACATAATCATGTTCCTTCAAGGAAACCCAGATTAGAGGCATGCTCGGGTCTGCAGGTAGATGTTCCTCTAGCTGTGGTTGAGGAGATCCTCCTGAAGCTGCCCGCTCATCAGGTGGTGCGAGTCTGTCGTCTGGTGTGTCACGAGTGGAAGGAGCTGGTGGACAGTGCTGCACACTGGAGAAGCGCTGCCGGAGAGAGAGGATCCAGCCGTGTGATGCTTCCAGACTGCCAGACGACTGGCGCTTGTTTTACTTCTTAACTAGGAAACGACGTAACTTGCTCAAGAATCCCAGAGCGGAAGATAAACTTAAAGGTTGGAATATTATACAGAATGGAGGTGACCGGTGGGCAGCGGAGGACAATAGGAAACCATTTCCGGATGAGACCgtcacaaaatgttttgtaacatctTACGGGTTATGTTTGAAGCAACAGGTTATTGATTTGAAGAAAGAAGGCTACGTTGATGCATTCATGGATCAAATGCAACCTCCTATCAAAATCACAGACTGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231640 lncRNA upstream 2369 10696302 ~ 10696558 (+) True G156413
TU231624 lncRNA upstream 24779 10666861 ~ 10674148 (+) True G156398
TU231628 lncRNA upstream 43217 10573214 ~ 10655710 (+) True G156401
TU231605 lncRNA upstream 178160 10520142 ~ 10520767 (+) True G156387
TU231594 lncRNA upstream 180176 10514992 ~ 10518751 (+) True LOC122328447
TU231646 lncRNA downstream 1834 10702729 ~ 10703093 (+) True G156417
TU231665 lncRNA downstream 26023 10726918 ~ 10727164 (+) True G156431
TU231666 lncRNA downstream 27038 10727933 ~ 10728230 (+) True G156432
TU231769 lncRNA downstream 128272 10829167 ~ 10901823 (+) False G156496
TU231767 lncRNA downstream 180999 10881894 ~ 10901823 (+) False G156496
XM_043224311.1 mRNA upstream 40180 10646963 ~ 10658747 (+) True LOC122328564
XM_043224618.1 mRNA upstream 132270 10555276 ~ 10566657 (+) True LOC122328734
XM_043225266.1 mRNA upstream 144915 10551104 ~ 10554012 (+) False LOC122329061
XM_043224138.1 mRNA upstream 181784 10514979 ~ 10517143 (+) False LOC122328447
XM_043224139.1 mRNA upstream 181784 10514985 ~ 10517143 (+) False LOC122328447
XM_043223977.1 mRNA downstream 64967 10765862 ~ 10772199 (+) True commd7
XM_043225170.1 mRNA downstream 85989 10786884 ~ 10870751 (+) True nol4lb
XM_043225171.1 mRNA downstream 85989 10786884 ~ 10870751 (+) False nol4lb
XM_043225173.1 mRNA downstream 173929 10874824 ~ 10884303 (+) True srms
XM_043225172.1 mRNA downstream 183571 10884466 ~ 10892545 (+) True ptk6b
TU231625 other upstream 126681 10563344 ~ 10572246 (+) True G156399
TU231621 other upstream 144207 10551097 ~ 10554720 (+) True LOC122329061
TU231564 other upstream 281029 10415671 ~ 10417898 (+) False LOC122328383
XR_006247902.1 other upstream 863448 9835395 ~ 9835479 (+) True LOC122329332
XR_006247904.1 other upstream 863757 9835096 ~ 9835170 (+) True LOC122329334
unassigned_transcript_2617 other downstream 201174 10902069 ~ 10902140 (+) True trnae-cuc_40
TU231770 other downstream 213009 10913904 ~ 10923988 (+) True G156497
XR_006247906.1 other downstream 374196 11075091 ~ 11075166 (+) True LOC122329336
XR_006247905.1 other downstream 374767 11075662 ~ 11075737 (+) True LOC122329335
TU231904 other downstream 473526 11174421 ~ 11177033 (+) True G156586

Expression Profile