RNA id: TU231665


Basic Information

Item Value
RNA id TU231665
length 247
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G156431
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 10726918 ~ 10727164 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCAATTACATTTAGTATCAACGTTACTCACCACCACCCCGTCCCGTTCGGCGCGCGGTAGTCGGGCCTCCTTCTGGCGATGCCGCGAATTCGGTGAATCGGTCGCGTTTGAACGCGAGAGGGTTCCGCCGCACGCGTTCCGCAACGTGGAAACACTGCAGGTCACCGGTGGGAACTTGGATTCATCTCAGTGACTCGAATCTTTTGAATCACACAACGACCTGTTCGCGGGTTTATGCAGATTGCGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231646 lncRNA upstream 23825 10702729 ~ 10703093 (+) True G156417
TU231643 lncRNA upstream 26023 10698798 ~ 10700895 (+) True G156414
TU231640 lncRNA upstream 30360 10696302 ~ 10696558 (+) True G156413
TU231624 lncRNA upstream 52770 10666861 ~ 10674148 (+) True G156398
TU231628 lncRNA upstream 71208 10573214 ~ 10655710 (+) True G156401
TU231666 lncRNA downstream 769 10727933 ~ 10728230 (+) True G156432
TU231769 lncRNA downstream 102003 10829167 ~ 10901823 (+) False G156496
TU231767 lncRNA downstream 154730 10881894 ~ 10901823 (+) False G156496
TU231762 lncRNA downstream 167944 10895108 ~ 10899719 (+) False G156496
TU231764 lncRNA downstream 167944 10895108 ~ 10901823 (+) True G156496
XM_043224311.1 mRNA upstream 68171 10646963 ~ 10658747 (+) True LOC122328564
XM_043224618.1 mRNA upstream 160261 10555276 ~ 10566657 (+) True LOC122328734
XM_043225266.1 mRNA upstream 172906 10551104 ~ 10554012 (+) False LOC122329061
XM_043224139.1 mRNA upstream 209775 10514985 ~ 10517143 (+) False LOC122328447
XM_043223977.1 mRNA downstream 38698 10765862 ~ 10772199 (+) True commd7
XM_043225170.1 mRNA downstream 59720 10786884 ~ 10870751 (+) True nol4lb
XM_043225171.1 mRNA downstream 59720 10786884 ~ 10870751 (+) False nol4lb
XM_043225173.1 mRNA downstream 147660 10874824 ~ 10884303 (+) True srms
XM_043225172.1 mRNA downstream 157302 10884466 ~ 10892545 (+) True ptk6b
TU231641 other upstream 26023 10698927 ~ 10700895 (+) False G156414
TU231625 other upstream 154672 10563344 ~ 10572246 (+) True G156399
TU231621 other upstream 172198 10551097 ~ 10554720 (+) True LOC122329061
TU231564 other upstream 309020 10415671 ~ 10417898 (+) False LOC122328383
XR_006247902.1 other upstream 891439 9835395 ~ 9835479 (+) True LOC122329332
unassigned_transcript_2617 other downstream 174905 10902069 ~ 10902140 (+) True trnae-cuc_40
TU231770 other downstream 186740 10913904 ~ 10923988 (+) True G156497
XR_006247906.1 other downstream 347927 11075091 ~ 11075166 (+) True LOC122329336
XR_006247905.1 other downstream 348498 11075662 ~ 11075737 (+) True LOC122329335
TU231904 other downstream 447257 11174421 ~ 11177033 (+) True G156586

Expression Profile