Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043224764.1 |
| length | 984 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC122328798 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 10675680 ~ 10678150 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0000413 | protein peptidyl-prolyl isomerization | biological_process |
| GO:0006457 | protein folding | biological_process |
| GO:0033017 | sarcoplasmic reticulum membrane | cellular_component |
| GO:0005528 | FK506 binding | molecular_function |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| id | description |
|---|---|
| K09568 | FKBP1; FK506-binding protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU231700 | lncRNA | downstream | 101 | 10667957 ~ 10675579 (-) | False | G156459 |
| TU231701 | lncRNA | downstream | 101 | 10667957 ~ 10675579 (-) | True | G156459 |
| TU231691 | lncRNA | downstream | 132793 | 10540899 ~ 10542887 (-) | True | G156452 |
| TU231560 | lncRNA | downstream | 287065 | 10387873 ~ 10388615 (-) | True | G156364 |
| TU231562 | lncRNA | downstream | 287990 | 10386954 ~ 10387690 (-) | False | G156364 |
| TU231718 | lncRNA | upstream | 18302 | 10696452 ~ 10696677 (-) | True | G156468 |
| TU231719 | lncRNA | upstream | 20447 | 10698597 ~ 10700224 (-) | True | G156469 |
| TU231724 | lncRNA | upstream | 24446 | 10702596 ~ 10702821 (-) | True | G156471 |
| TU231736 | lncRNA | upstream | 49814 | 10727964 ~ 10728248 (-) | True | G156478 |
| XR_006247879.1 | lncRNA | upstream | 202441 | 10880591 ~ 10882652 (-) | True | LOC122329022 |
| XM_043224691.1 | mRNA | downstream | 1583 | 10662263 ~ 10674097 (-) | True | LOC122328766 |
| XM_043224620.1 | mRNA | downstream | 93250 | 10568565 ~ 10582430 (-) | False | LOC122328736 |
| XM_043224621.1 | mRNA | downstream | 93251 | 10568565 ~ 10582429 (-) | False | LOC122328736 |
| XM_043224619.1 | mRNA | downstream | 98287 | 10568565 ~ 10577393 (-) | True | LOC122328736 |
| XM_043224136.1 | mRNA | downstream | 150308 | 10522098 ~ 10525372 (-) | True | LOC122328446 |
| XM_043224763.1 | mRNA | upstream | 855 | 10679005 ~ 10686715 (-) | True | LOC122328797 |
| XM_043224762.1 | mRNA | upstream | 11514 | 10689664 ~ 10694950 (-) | True | LOC122328796 |
| XM_043225474.1 | mRNA | upstream | 27833 | 10705983 ~ 10709169 (-) | True | cdc42l2 |
| XM_043224777.1 | mRNA | upstream | 31196 | 10709346 ~ 10727516 (-) | False | dnmt3bb.2 |
| XM_043224776.1 | mRNA | upstream | 40084 | 10718234 ~ 10727569 (-) | True | dnmt3bb.2 |
| TU231532 | other | downstream | 308311 | 10365543 ~ 10367369 (-) | False | LOC122328779 |
| TU231517 | other | downstream | 436407 | 10237096 ~ 10239273 (-) | False | ankrd52a |
| TU231501 | other | downstream | 443761 | 10230546 ~ 10231919 (-) | False | ankrd52a |
| TU231376 | other | downstream | 841998 | 9832128 ~ 9833682 (-) | False | zgc:153284 |
| TU231375 | other | downstream | 842047 | 9832128 ~ 9833633 (-) | False | zgc:153284 |
| TU232124 | other | upstream | 422594 | 11100744 ~ 11105223 (-) | True | G156746 |
| unassigned_transcript_2621 | other | upstream | 839860 | 11518010 ~ 11518081 (-) | True | trnah-gug_32 |
| TU232410 | other | upstream | 1063250 | 11741400 ~ 11746620 (-) | False | LOC122328546 |
| TU232414 | other | upstream | 1063250 | 11741400 ~ 11746620 (-) | True | LOC122328546 |
| XR_006247903.1 | other | upstream | 1064520 | 11742670 ~ 11742803 (-) | True | LOC122329333 |
