RNA id: TU232066


Basic Information

Item Value
RNA id TU232066
length 401
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G156700
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11654916 ~ 11655316 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTTACAGTCAGGGTCACAACCGTTCTGCAGCAGGAATGTGGCATTCTCTCGGAGACCGTGGACAACGGCGAGAAACAGCGGAGTCTCCCCTCTCAGAGTACGGCATTGCCCTGACCCCTGAGGAGATGCTGAATAAGGAATTCTCATTAAGGAATGTTGTAACATGTTCTGGGGGGTTTAGAGAGGTAACTATCAGGAAGCTGATTTTcgcagataaataaaaaaaaatgtaactgagCTTACAACTAAGATTTTATCACAATTTGAGTTTATGTATTGCaattttgacttctttttttttaccaattatAAACAccaaattcagatttttttttgtaattctaaaattacaactcacaattctgatttagttttattcttcTTATTTTGTGAATGTTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232065 lncRNA upstream 299 11654255 ~ 11654617 (+) True G156699
TU232064 lncRNA upstream 756 11653380 ~ 11654160 (+) True G156698
TU232052 lncRNA upstream 3809 11614130 ~ 11651107 (+) True G156690
TU232041 lncRNA upstream 98997 11540640 ~ 11555919 (+) True G156685
TU232039 lncRNA upstream 114601 11539615 ~ 11540315 (+) True G156684
TU232067 lncRNA downstream 479 11655795 ~ 11656380 (+) True G156701
TU232236 lncRNA downstream 42098 11697414 ~ 11745778 (+) False kctd6b
TU232232 lncRNA downstream 61455 11716771 ~ 11745343 (+) False kctd6b
TU232239 lncRNA downstream 61455 11716771 ~ 11746570 (+) False kctd6b
TU232234 lncRNA downstream 71972 11727288 ~ 11745343 (+) False kctd6b
XM_043224284.1 mRNA upstream 16893 11634276 ~ 11638023 (+) True LOC122328536
XM_043224285.1 mRNA upstream 16893 11634276 ~ 11638023 (+) False LOC122328536
XM_043224590.1 mRNA upstream 125255 11527406 ~ 11529661 (+) True apobec2b
XM_043224589.1 mRNA upstream 130048 11520750 ~ 11524868 (+) True si:dkey-109j17.5
XM_043224592.1 mRNA upstream 134311 11518832 ~ 11520605 (+) True ccdc115
XM_043224116.1 mRNA downstream 30396 11685712 ~ 11693491 (+) True atp6ap1lb
XM_043225498.1 mRNA downstream 40500 11695816 ~ 11704390 (+) True slmapb
XM_043225499.1 mRNA downstream 40500 11695816 ~ 11704390 (+) False slmapb
XM_043224289.1 mRNA downstream 50443 11705759 ~ 11722286 (+) True flnb
XM_043224291.1 mRNA downstream 67840 11723156 ~ 11726492 (+) True abhd6b
unassigned_transcript_2622 other upstream 136380 11518465 ~ 11518536 (+) True trnae-uuc_33
unassigned_transcript_2620 other upstream 139045 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2619 other upstream 141070 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2618 other upstream 142218 11512625 ~ 11512698 (+) True trnan-guu_35
TU231904 other upstream 477883 11174421 ~ 11177033 (+) True G156586
XR_006247901.1 other downstream 2399048 14054364 ~ 14054500 (+) True LOC122329331
XR_006247900.1 other downstream 2401369 14056685 ~ 14056821 (+) True LOC122329330
XR_006247782.1 other downstream 2644385 14299701 ~ 14343274 (+) False si:dkey-151g10.3
TU233368 other downstream 3028674 14683990 ~ 14685316 (+) False LOC122328906
TU233419 other downstream 3056831 14712147 ~ 14714533 (+) True LOC122328914

Expression Profile