RNA id: TU232436



Basic Information


Item Value
RNA id TU232436
length 466
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G156962
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11762440 ~ 11763023 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTTCCTTTTATCCAGTCTCCCAATTTTTGCAGTGTAGTACAGGAACGCCCTCACATGTCGTTAAGCACGCAGGGCACTTATAAGTACGCAAGTATATGATATCCAGTCATTCAGCGCAATTACGGACTCTACGCTGCACGCCCTTCGCCCGGGacttcaagaaacatttacgCCAAATGCAAGACGTTTAGTGGCGAACGTCTGCGTCAGTGAATTTGAACCCTAAGCGAACTTACAGATTTAACGCATAACAGGAATAAAAAGTCTGCGTGTGGCACAGGCAGCGGAGAGTGAACTTGACTGGAGCGCGGTGCACAAATCTCACTGCACGACCCTCCCGGAGCCGACGAGCGTCCCTGGAGGAAAAGCTTGCGCGCTGAACTCGAGAAAACACGCTAGTGACAGCCCTCAGTCGTTTCTGCCTCCTTCTGTCCTGTCTGGTCTTAATGCGAGAACCTTAATTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU232213 lncRNA downstream 222395 11539623 ~ 11540045 (-) True G156812
XR_006247856.1 lncRNA downstream 385752 11376177 ~ 11376688 (-) True LOC122328925
TU232181 lncRNA downstream 408612 11353159 ~ 11353828 (-) True G156785
TU232149 lncRNA downstream 517620 11242600 ~ 11244820 (-) True G156762
TU232146 lncRNA downstream 599421 11162664 ~ 11163019 (-) True G156759
TU232440 lncRNA upstream 686 11763709 ~ 11850582 (-) False atp2b3b
TU232453 lncRNA upstream 18544 11781567 ~ 11782366 (-) True G156971
TU232457 lncRNA upstream 30580 11793603 ~ 11851710 (-) True G156972
TU232469 lncRNA upstream 292223 12055246 ~ 12061368 (-) True G156978
TU232458 lncRNA upstream 298424 12061447 ~ 12064715 (-) True G156973
XM_043224295.1 mRNA downstream 15853 11744720 ~ 11746587 (-) False LOC122328546
XM_043224297.1 mRNA downstream 24855 11736897 ~ 11737585 (-) True LOC122328548
XM_043224292.1 mRNA downstream 27494 11732231 ~ 11734946 (-) True ognb
XM_043224286.1 mRNA downstream 79033 11657491 ~ 11683407 (-) True dnah12
XM_043224283.1 mRNA downstream 105837 11651399 ~ 11656603 (-) True asb14b
XM_043225317.1 mRNA upstream 36908 11799931 ~ 11801632 (-) True si:dkey-93l1.9
XM_043225316.1 mRNA upstream 36912 11799935 ~ 11801632 (-) False si:dkey-93l1.9
XM_043225314.1 mRNA upstream 38755 11801778 ~ 11805140 (-) True haus7
XM_043225318.1 mRNA upstream 43333 11806356 ~ 11807389 (-) True LOC122329113
XM_043224701.1 mRNA upstream 45746 11808769 ~ 11857968 (-) True atp2b3b
TU232410 other downstream 15820 11741400 ~ 11746620 (-) False LOC122328546
TU232414 other downstream 15820 11741400 ~ 11746620 (-) True LOC122328546
TU232418 other downstream 15820 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other downstream 17045 11745262 ~ 11745395 (-) True LOC122329329
XR_006247903.1 other downstream 19637 11742670 ~ 11742803 (-) True LOC122329333
XR_006247884.1 other upstream 36899 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU232479 other upstream 159821 11922844 ~ 11924650 (-) True G156985
TU233029 other upstream 1378055 13141078 ~ 13217408 (-) True G157367
TU233040 other upstream 1517233 13280256 ~ 13282327 (-) True G157373
TU233846 other upstream 2563943 14326966 ~ 14330784 (-) True G157909

Expression Profile