RNA id: TU232551



Basic Information


Item Value
RNA id TU232551
length 913
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G157036
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12157402 ~ 12158314 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTGAGGTTTAACGATCAGTGATCTAAGCGGAGAAGCGAAGCAACGACCCGGTACCCCGCACGTTGACAAGTTCGCTCCGGTAACGTTATGCGGTCTATTTTTCCTTGGGCGAACCTCGAGATACTTTTAAAAGGCTGTAATCTGAGCAGTTGTGCAGATACGGGGGCAGTCAGATTATCTCGCTATCCTTTCAGGCTAGCTTTCAGGGAAACGATGCGAGGACGTTTTTGCGATAACGTTAGCTCGCGAAAACCAAGCTTGTTAGCTTAGCGCAACCTTCTTGCAAAGCGAGAAGGAAATCCGAAAAATAACCCGAACCATATGACGGGAAAACCAGCCAACTTTTCCGCAAGGATGAGTTGGTTTCTTTTATCCCCAGCTCGTGATGCGCGCATGGGGCGCATTGTCTCGCGCATGCCGTTAGCTGGTTGTTCCCGAAGTGGCCAGTTGAAATTTACGGGCAAATTGTTGCGCCCGACTAGCTGACTTCAGCGGTAAAAGCTTGGCTTTGGCTAGCCGTAACTGTGTTCTTGTGGAGACGTTAGCTAGTTAGCATTAGCTAGGCACATAAGTATGCAGAACTCACCACATCCGATATTACTTGGCCTCTCCACGGTACTGAATACAGAAATACCTCGCGGGCAAAagataaacaacaaaaaggtcAAATCAAACCGTTTCTGTAACTTTATCCCTGGAAGTGGCGGGAGCTCCGTGACTTTCCAGTGTGAGGGGAGGCTGGACGGTTGCCTTGACCGGCTATTCCCTGCACCGTTAACAGTTCAGCAAGTATTCTTCAGTTCAGGAGCGTAGAACCAACATGTGCAGAGTTTGAGTTGAGACTGTGCCATTGTTCAAGATACAGGGAAAcaacacaaatgtgtgtttatattaaacACTTATATACGGCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU232550 lncRNA downstream 1102 12151360 ~ 12156300 (-) True G157035
TU232520 lncRNA downstream 57676 12098967 ~ 12099726 (-) True G157012
TU232458 lncRNA downstream 92687 12061447 ~ 12064715 (-) True G156973
TU232460 lncRNA downstream 92687 12061447 ~ 12064715 (-) False G156973
TU232469 lncRNA downstream 96034 12055246 ~ 12061368 (-) True G156978
TU232534 lncRNA upstream 15072 12173386 ~ 12174187 (-) True G157022
TU232655 lncRNA upstream 81620 12239934 ~ 12241416 (-) True G157100
TU232657 lncRNA upstream 84777 12243091 ~ 12243681 (-) True G157102
TU232662 lncRNA upstream 87903 12246217 ~ 12251981 (-) True G157104
TU232663 lncRNA upstream 87903 12246217 ~ 12251981 (-) False G157104
XM_043225159.1 mRNA downstream 91230 12065347 ~ 12066172 (-) True taf13
XM_043225154.1 mRNA downstream 108611 12047116 ~ 12048791 (-) True LOC122329006
XM_043224192.1 mRNA downstream 112097 12038033 ~ 12045305 (-) True si:rp71-17i16.5
XM_043224193.1 mRNA downstream 124656 12030850 ~ 12032746 (-) True si:rp71-17i16.6
XM_043224187.1 mRNA downstream 132291 11995970 ~ 12025111 (-) True lamb2l
XM_043225497.1 mRNA upstream 46019 12204333 ~ 12212104 (-) True znf362b
XM_043224674.1 mRNA upstream 226529 12384843 ~ 12440260 (-) True megf6a
XM_043224675.1 mRNA upstream 226529 12384843 ~ 12418303 (-) False megf6a
XM_043225274.1 mRNA upstream 358608 12516922 ~ 12519193 (-) True her12
XM_043224001.1 mRNA upstream 363507 12521821 ~ 12531561 (-) True LOC122328351
TU232479 other downstream 232752 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 355770 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU232418 other downstream 410782 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other downstream 412007 11745262 ~ 11745395 (-) True LOC122329329
XR_006247903.1 other downstream 414599 11742670 ~ 11742803 (-) True LOC122329333
TU233029 other upstream 982764 13141078 ~ 13217408 (-) True G157367
TU233040 other upstream 1121942 13280256 ~ 13282327 (-) True G157373
TU233846 other upstream 2168652 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 2422780 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 3189103 15347417 ~ 15474377 (-) False magi3a

Expression Profile