RNA id: TU232812



Basic Information


Item Value
RNA id TU232812
length 1244
lncRNA type intronic
GC content 0.43
exon number 2
gene id G157222
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12524479 ~ 12529493 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTATAAGCagataaagtgtatttttattttctagttcAATATGAAGTAATGCACAGAAGACACCTTCACAGAAGGTAAAAACTTGATTTtgcaaataaaagacaaaatttAAATCACTAACAGTGACAATACACAACTACCCTTTACAGGGGAAACGTCTCATTCATgtaaacacatgcaaacaatCATTTGTGctttaaacacacaataaaatatccttcaaatgaagaaatgtttctcataTAATAAGGGAAGAATTAGATCTGTTTGAAACAacagaaatataacaaaaagcTCTCAGTAAATGAAAGCAGCGTCATCATCCTTTAGATGCAGAGAGAATAAACCCAATATGGGTGAAAGAGCTAAAGGAGCTCAAACGTCTGAATCAGACTTTtctctaaatataaaatgtcaaaattgtaGCAATCATTAAATGATTCATCACAGCAAATGATTCTGTAGATTCTGGTCAAATATCACCGATCATACAGTTTGAGTGAAACACAAGCTTTCTCTGAAAGCAGATTAAAGGTCCTGCAAAAGCAGGAGAGCGGAAATCAATTCCTACGTTTGAATTTCAGTCCATGCCAATCTCAGACTGACATTATGAATTCTGTCTGCTAAATCTCTACCAGGGTCTCCAGAGCGCCAGAGTCTGCTCTTTGCCGCTGCTCTGAGCGGCCGCTGGACTGATCTGAGGCACTCGTGTCTTGTTCTCTGTGCAGGGCTGCGTGTGCAGGAAGTGCTTCAGCAGTCTTCTGTGGGACTCCGTCTGCACTGGACACTGAGACAGGAAGCTGACGGCCTCCTGCACACATCTGGAGCGTCCGTCACGAGCTGCAGGAGAGCCGCACGCCGAGGGACTCTGGGAGCGCTGCTGGCGTCTCAAGAAATCCAGCGTCATCTCCAGGATATCAGCTTTCTCCTGTCTGGAGTCGGGCTGTTGCTTCAGGAACTCTTGACCCAGAAGAGACTTGAGCTTCTCGATGCTGCTGTTGATTCGTTCTCTCCGGATCTTCTCCACTATTGGCTTTCTCAGCTGaggaaacaacaaaaacatttaggaaCTCCGGTCCACATGTTTATATCTCTGAAGAATATATGATTCTGTGGTGCGAGATATGAGATGTTGAATATTTACCTTGTTTGTGAGAGGAAGCTGTTCTCTGCTGATGATCGATCCAGTGATTGTAGGAGCCATGGCTGTGTGTCTTGTGTTCAGTTCTCCGTCAGGATCGGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU232665 lncRNA downstream 271543 12252731 ~ 12252936 (-) True G157106
TU232662 lncRNA downstream 272498 12246217 ~ 12251981 (-) True G157104
TU232663 lncRNA downstream 272498 12246217 ~ 12251981 (-) False G157104
TU232657 lncRNA downstream 280798 12243091 ~ 12243681 (-) True G157102
TU232655 lncRNA downstream 283063 12239934 ~ 12241416 (-) True G157100
TU232817 lncRNA upstream 4265 12533758 ~ 12533979 (-) True G157224
TU232855 lncRNA upstream 89526 12619019 ~ 12620057 (-) True G157255
TU232926 lncRNA upstream 323746 12853239 ~ 12853501 (-) True G157295
TU232929 lncRNA upstream 324804 12854297 ~ 12855852 (-) True G157298
TU232998 lncRNA upstream 500373 13029866 ~ 13040397 (-) True G157349
XM_043225274.1 mRNA downstream 5286 12516922 ~ 12519193 (-) True her12
XM_043224674.1 mRNA downstream 84219 12384843 ~ 12440260 (-) True megf6a
XM_043224675.1 mRNA downstream 106176 12384843 ~ 12418303 (-) False megf6a
XM_043225497.1 mRNA downstream 312375 12204333 ~ 12212104 (-) True znf362b
XM_043225159.1 mRNA downstream 458307 12065347 ~ 12066172 (-) True taf13
XM_043225400.1 mRNA upstream 16578 12546071 ~ 12553730 (-) False rnf207b
XM_043225399.1 mRNA upstream 16578 12546071 ~ 12553728 (-) False rnf207b
XM_043225401.1 mRNA upstream 16578 12546071 ~ 12552889 (-) True rnf207b
XM_043225402.1 mRNA upstream 25918 12555411 ~ 12561675 (-) True rcc2
XM_043225403.1 mRNA upstream 25918 12555411 ~ 12561173 (-) False rcc2
TU232479 other downstream 599829 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 722847 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU232418 other downstream 777859 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other downstream 779084 11745262 ~ 11745395 (-) True LOC122329329
XR_006247903.1 other downstream 781676 11742670 ~ 11742803 (-) True LOC122329333
TU233029 other upstream 611585 13141078 ~ 13217408 (-) True G157367
TU233040 other upstream 750763 13280256 ~ 13282327 (-) True G157373
TU233846 other upstream 1797473 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 2051601 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 2817924 15347417 ~ 15474377 (-) False magi3a

Expression Profile