RNA id: TU233019



Basic Information


Item Value
RNA id TU233019
length 711
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G157361
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13117380 ~ 13118168 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTCCTCATTTCCCAATATATTGTCAATACCGAACACTTGGGCGGCAAGGATACCAACAGTGATGAAAAGCTGAGGCACTATTCCAATGGCCCCCCTGAAATTCTTGGGTGCGATTTCTCCCAAATACATGGGCACCACGTTGGAGGACAGGCCTGTAAAGCACAGTCACATCCTGTCATGTCTAAGCACACCACTGATCCAAACCGACAGGAGGAATATTCTACTGACCTGCACAGATGCCCACTAGAAAGCGTGCCACAATGATGATTTCAAATGACCCTGCCACTTTACTCACACCCATCATTATAGCAGGAATAATAGAGAAGACGTTGTTGAACAGAAGTGTGcctttCTTCCGAATTTGTTCACCAATGGAGCTACCATGAGAGATCCAAAAAACCCACCCAGTGGGTACATGGACACAGTTACGGACCACAGGAGGGTCAAGAGATTTTCTGACATTGGGCCATAACGATTCACATATATTTGGCTGTAGAACCGCTGCATGTCCTTTGATCACAATATCAGAGAAGTTTATCAATGACGAAATgtttaaacataatataatatcataatatataatataatatcataataaatattatcgGTCAGTACCGGGGCAGGTGAGTTGACAACAGCCACATTGTATCCATACTGAAAAGACGAGCCAAATCCAGCAATCAGAGAAGCTGCAGCCAGGATCAGTGTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233018 lncRNA downstream 1249 13115910 ~ 13116131 (-) True G157360
TU233005 lncRNA downstream 10187 13106453 ~ 13107193 (-) False G157355
TU233004 lncRNA downstream 10460 13105761 ~ 13106920 (-) True G157355
TU233007 lncRNA downstream 13829 13103111 ~ 13103551 (-) True G157357
TU233002 lncRNA downstream 53476 13063654 ~ 13063904 (-) True G157353
TU233021 lncRNA upstream 1015 13119183 ~ 13119553 (-) True G157363
TU233022 lncRNA upstream 1830 13119998 ~ 13120516 (-) True G157364
TU233023 lncRNA upstream 3645 13121813 ~ 13122026 (-) True G157365
TU233620 lncRNA upstream 315587 13433755 ~ 13435861 (-) True G157765
TU233665 lncRNA upstream 624089 13742257 ~ 13747171 (-) True G157799
XM_043225087.1 mRNA downstream 37156 13067327 ~ 13080224 (-) True spsb1
XM_043224194.1 mRNA downstream 176495 12936321 ~ 12940885 (-) False LOC122328487
XM_043224195.1 mRNA downstream 176495 12936321 ~ 12940885 (-) True LOC122328487
XM_043224260.1 mRNA downstream 186567 12911070 ~ 12930813 (-) True LOC122328520
XM_043225364.1 mRNA downstream 306811 12771790 ~ 12810569 (-) True phc2a
XM_043225300.1 mRNA upstream 5280 13123448 ~ 13128638 (-) False ca6
XM_043225299.1 mRNA upstream 5280 13123448 ~ 13128638 (-) True ca6
XM_043224557.1 mRNA upstream 258276 13376444 ~ 13401670 (-) True noc2l
XM_043224798.1 mRNA upstream 318374 13436542 ~ 13442457 (-) True LOC122328822
XM_043225556.1 mRNA upstream 375413 13493581 ~ 13495390 (-) True her9
TU232479 other downstream 1192730 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 1315748 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU232418 other downstream 1370760 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other downstream 1371985 11745262 ~ 11745395 (-) True LOC122329329
XR_006247903.1 other downstream 1374577 11742670 ~ 11742803 (-) True LOC122329333
TU233029 other upstream 22910 13141078 ~ 13217408 (-) True G157367
TU233040 other upstream 162088 13280256 ~ 13282327 (-) True G157373
TU233846 other upstream 1208798 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 1462926 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 2229249 15347417 ~ 15474377 (-) False magi3a

Expression Profile