RNA id: TU233620


Basic Information

Item Value
RNA id TU233620
length 2087
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G157765
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13433755 ~ 13435861 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGTTTCATCACTGtttatttgtcaaaaacaaTGCGAAAACAATACAgatgtattttataatgaataactTTGACCTCCACAGgacaatttcttttttaacaaaaagtaGAAGACCATAatgaagtataaataaaataaaaataatattaaatcaacaataataaatgcttacatttaaaacttaaatagaaaaaaattgcatatttacattgcattaaaaaaatatgcatataaatcaaTAGTTTGTAGGACTCACAAactagactaaatgtaaaaactccCAAATGCTAccttttaagtattttttgctTCTATACATAAATGAGTAAATCATTGTAATACAATTGTTTGTACCGAATGCATACAGCAGTCTGAAACCATCACCACACATATAAAGGGTATTACTTGTGCAAAATATGTCATAGAGCCACTGAATAAACAAAGTGTGCATATCCAGATGCTCGGGCATGCCGGCCCACGGTGAAAACATGCCCAGTGTGCATGTGTGGCTTTGATTAGTCTGCTATGTGTGCAAGTCCGGACGGGCATAAGCCCATTGTTCTCTTTTATGACCATCTCTGCTGTGTTGTCATAGCGCCCAGGCCTTGAGCTCCAAAGTAAGCCGGTGTCCGGTGTGGTAAAGGTCCAGGCAGGGGCTGAATCATCCCATTATCCGGGTCAAACTCCCATATGTTATCATAGTCCATTTCCTGGTCATCTGGATCCACTGGCTGAAGGTAAGAGTCGTCTGTGAGAAACAAAGGGCAATCATGTTttcaaaaacttaaaatatttagttgaaATCCATTCCtgtaaaattcagctttcaatTATTGAAAGGCACCCTGCTCTTAAGAAATATACCTCCAATATTTCGGTATCAAAATTCACACGCCAAGTTTAAGAAGTTAGTAAACTGAGCCATCTAAATAACTTCATGCCCTAATTTAGGATCTAACGTATCGTTTGTTGTGTTCTTTTCCACAGAAGGGCTCTAAATGTCTTCCTGGATCTCCCACTTGTGTGCTTTAAATCACCCTCGGTGGTAATTCTGTCCATTCGCTGGTCTTTCCTTCATGTGCCACCTGCAgtgctgtcatttaaaataccCTGGGCCTGAGACTCAAgtcttacacacacaaacatacacatgcCCCCTTCATCTGCACACTTGTTTCCACTGCCATGTCCTGCCTGGACAACCACActcacatgcatgtgtgtgtgtgtgtgctagagAAGGTCATTCTAAAACCGTCCCATTAGCTGTGCCATAAGAGTCTGGCCTATGCACGTGTCACCACGGATTATTTCCTCTTTATGGTGTTGTCTTTAAACCTGACAAGTGATTTTTTGATCAGTTGAACCAGCCTATAAAACACTGATGATCTAGGTCAACATTTCATACGTTAAACAAAACCTGTGGCCACAAAACTGGTCGTGCAACTCACACTGTTTATCTTCGGTATCTATTTCTTTATCTACATCCGTGAAATGCGCGTAACATTGTGCCATTGTGGTGCTGTGACTGCCTCCTAACTTCAACATGTCAAAAATTCTCACCTGGTGAGTAACTGTAAGATATCTGCTGCGACTCCATGACAGTGTGACCTGAGAATCCTCTctgtaaaagacaaaacaagagaTCATTTTCACATACTGTTTTGAAGCTACATTCACGCAGAACaacatttctgtctttcttaattagtttttgtcctattaattcattacaaaatgcaatttgtacctttcaaaagttcTGAAGACagaagaaagttttttttattaagcacagggggaaattaaattgatcaaaagagaaattaaaGAAGCTTATAATGcttcaaaaaaaatctattttcaaTAACTTCTctttaattttctattcatctgaGAATACTGAAAGATTCCACAAAAAATTTCAAGCAGCACCACGGTTttcaacactaataataataagaaacattaACTAAACCAGCATATTggaaagatttctgaagaatcgtgtgACTCTTcatactggagtaatgactgctgaattcagctttgcatcactggaataaactactattgaaatacatta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233023 lncRNA downstream 311729 13121813 ~ 13122026 (-) True G157365
TU233022 lncRNA downstream 313239 13119998 ~ 13120516 (-) True G157364
TU233021 lncRNA downstream 314202 13119183 ~ 13119553 (-) True G157363
TU233019 lncRNA downstream 315587 13117380 ~ 13118168 (-) True G157361
TU233018 lncRNA downstream 317624 13115910 ~ 13116131 (-) True G157360
TU233665 lncRNA upstream 306396 13742257 ~ 13747171 (-) True G157799
TU233679 lncRNA upstream 336914 13772775 ~ 13773308 (-) True G157813
TU233703 lncRNA upstream 388132 13823993 ~ 13825589 (-) True G157826
TU233774 lncRNA upstream 621976 14057837 ~ 14075937 (-) True G157863
TU233788 lncRNA upstream 706078 14141939 ~ 14142168 (-) True G157874
XM_043224557.1 mRNA downstream 32085 13376444 ~ 13401670 (-) True noc2l
XM_043225300.1 mRNA downstream 305117 13123448 ~ 13128638 (-) False ca6
XM_043225299.1 mRNA downstream 305117 13123448 ~ 13128638 (-) True ca6
XM_043225087.1 mRNA downstream 353531 13067327 ~ 13080224 (-) True spsb1
XM_043224194.1 mRNA downstream 492870 12936321 ~ 12940885 (-) False LOC122328487
XM_043224798.1 mRNA upstream 681 13436542 ~ 13442457 (-) True LOC122328822
XM_043225556.1 mRNA upstream 57720 13493581 ~ 13495390 (-) True her9
XM_043224635.1 mRNA upstream 343164 13779025 ~ 13783742 (-) True LOC122328742
XM_043223983.1 mRNA upstream 399195 13835056 ~ 13851039 (-) True arhgef19
XM_043223984.1 mRNA upstream 416605 13852466 ~ 13868569 (-) True ano11
TU233040 other downstream 151428 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 216347 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 1509105 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 1632123 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU232418 other downstream 1687135 11744119 ~ 11746620 (-) False LOC122328546
TU233846 other upstream 891105 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 1145233 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1911556 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 2263408 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 2263408 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile