RNA id: TU233679


Basic Information

Item Value
RNA id TU233679
length 508
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G157813
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13772775 ~ 13773308 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTagaatgaaaataacaaatggAAATGTAGATTATAGGgggaaatgttatatttttaaataactatgtAGACATCTGATATAATCAACTGTTCTTTATCAGTATAGCActcatactctcacacacacacacacacacacacagtgtgagCTGTGCTATACCTGCAGTGAACCACTATCGGTCCACTCTCTGGAATGGCACTCTGGGTTCTGTTGACTTGCTCCAGGAAACTCAAGACTCCTCCAGGTTCATTGGGAACACCGTGATCAGGCCAGCTCAGGTACTGATAGTGCCAGATACACCTGGGAGGCTCTCTCTTCAGTACAGATACAaacaaaattaagaataaaGACTGCACCTAAATTGGATTTGCACAAAAATGCAACGTAACACATCACTTTGCAACGAATTTGCAACAAAAGGCTACTTCCATTTTAATTGATGACTCCCAAGCTTTGCACAGTGAGTTTCAGCTTCTTCCCGCTGGAATTTTTTAATCTCAAAGTGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233665 lncRNA downstream 25604 13742257 ~ 13747171 (-) True G157799
TU233620 lncRNA downstream 336914 13433755 ~ 13435861 (-) True G157765
TU233023 lncRNA downstream 650749 13121813 ~ 13122026 (-) True G157365
TU233022 lncRNA downstream 652259 13119998 ~ 13120516 (-) True G157364
TU233021 lncRNA downstream 653222 13119183 ~ 13119553 (-) True G157363
TU233703 lncRNA upstream 50685 13823993 ~ 13825589 (-) True G157826
TU233774 lncRNA upstream 284529 14057837 ~ 14075937 (-) True G157863
TU233788 lncRNA upstream 368631 14141939 ~ 14142168 (-) True G157874
TU233789 lncRNA upstream 370354 14143662 ~ 14143930 (-) True G157875
TU233765 lncRNA upstream 449501 14222809 ~ 14225394 (-) False zbtb48
XM_043225556.1 mRNA downstream 277385 13493581 ~ 13495390 (-) True her9
XM_043224798.1 mRNA downstream 330318 13436542 ~ 13442457 (-) True LOC122328822
XM_043224557.1 mRNA downstream 371105 13376444 ~ 13401670 (-) True noc2l
XM_043225300.1 mRNA downstream 644137 13123448 ~ 13128638 (-) False ca6
XM_043224635.1 mRNA upstream 5717 13779025 ~ 13783742 (-) True LOC122328742
XM_043223983.1 mRNA upstream 61748 13835056 ~ 13851039 (-) True arhgef19
XM_043223984.1 mRNA upstream 79158 13852466 ~ 13868569 (-) True ano11
XM_043223985.1 mRNA upstream 80965 13854273 ~ 13867893 (-) False ano11
XM_043223981.1 mRNA upstream 96080 13869388 ~ 13881718 (-) False plekhm2
TU233040 other downstream 490448 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 555367 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 1848125 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 1971143 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2027380 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 553658 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 807786 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1574109 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1925961 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1925961 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile