RNA id: TU233788



Basic Information


Item Value
RNA id TU233788
length 230
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G157874
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14141939 ~ 14142168 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATAGCAAGCATCCTGTTTTCCAAGTAATTCATCAGGCCCTGATAGTGGTACTGGCCTCTTGAACGAGCCAAAACAGTCAAGAGAATGAAGAACACGGTGGCTTTCATGGTGGTTTTGGAGAAGGGACACTCTCAGGTActccacaaaacaaagaaacactcCAAACTCTGAGGCTGATGTGCTGCAGCTGCTCACGGGCCGCCCTTGTCCTCTAGCGAGAGTGTGAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233774 lncRNA downstream 66002 14057837 ~ 14075937 (-) True G157863
TU233703 lncRNA downstream 316350 13823993 ~ 13825589 (-) True G157826
TU233679 lncRNA downstream 368631 13772775 ~ 13773308 (-) True G157813
TU233665 lncRNA downstream 394768 13742257 ~ 13747171 (-) True G157799
TU233620 lncRNA downstream 706078 13433755 ~ 13435861 (-) True G157765
TU233789 lncRNA upstream 1494 14143662 ~ 14143930 (-) True G157875
TU233765 lncRNA upstream 80641 14222809 ~ 14225394 (-) False zbtb48
TU233794 lncRNA upstream 94184 14236352 ~ 14237014 (-) True G157880
TU233804 lncRNA upstream 100413 14242581 ~ 14243955 (-) True G157885
TU233829 lncRNA upstream 160704 14302872 ~ 14343270 (-) True G157901
XM_043224788.1 mRNA downstream 37713 14100397 ~ 14104226 (-) True sdf4
XM_043224794.1 mRNA downstream 47503 14085586 ~ 14094436 (-) True ctdsp2
XM_043224173.1 mRNA downstream 101861 14031726 ~ 14040078 (-) True tmem240a
XM_043224172.1 mRNA downstream 101863 14031726 ~ 14040076 (-) False tmem240a
XM_043224171.1 mRNA downstream 112771 14025634 ~ 14029168 (-) True LOC122328469
XM_043225302.1 mRNA upstream 8355 14150523 ~ 14196687 (-) True syt6a
XM_043225463.1 mRNA upstream 82420 14224588 ~ 14233051 (-) True zbtb48
XM_043225081.1 mRNA upstream 115682 14257850 ~ 14272460 (-) True avpr2aa
XM_043224951.1 mRNA upstream 144793 14286961 ~ 14293566 (-) True idh3g
XM_043224624.1 mRNA upstream 286804 14428972 ~ 14524636 (-) False lrp1ab
TU233040 other downstream 859612 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 924531 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2217289 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2340307 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2396544 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 184798 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 438926 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1205249 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1557101 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1557101 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile