RNA id: TU233789



Basic Information


Item Value
RNA id TU233789
length 269
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G157875
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14143662 ~ 14143930 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACTCTtccttcttcctctctctgacaACCACGTCCTGTTCCACCATTTTGTCTGCTGTTTTCACACAAGGCTTAGGGGGATTTTTGGTTTCAATGTAGTCCATCTCACGCTCCACCCGGTCTACCCTTGCTCCCGCACCCTCCATGTCTGAACGTAGTTTGGTGTGCTCCTTACTCAACTTCTCCAACAGGTCTGCGGCCTGCTGCCTGAATTCCTTCAGGTCGGAGTTGTAGCGGTTGTTCTGTTCATGCCACAAGGCAATGCGTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233788 lncRNA downstream 1494 14141939 ~ 14142168 (-) True G157874
TU233774 lncRNA downstream 67725 14057837 ~ 14075937 (-) True G157863
TU233703 lncRNA downstream 318073 13823993 ~ 13825589 (-) True G157826
TU233679 lncRNA downstream 370354 13772775 ~ 13773308 (-) True G157813
TU233665 lncRNA downstream 396491 13742257 ~ 13747171 (-) True G157799
TU233765 lncRNA upstream 78879 14222809 ~ 14225394 (-) False zbtb48
TU233794 lncRNA upstream 92422 14236352 ~ 14237014 (-) True G157880
TU233804 lncRNA upstream 98651 14242581 ~ 14243955 (-) True G157885
TU233829 lncRNA upstream 158942 14302872 ~ 14343270 (-) True G157901
TU233833 lncRNA upstream 180786 14324716 ~ 14325647 (-) True G157905
XM_043224788.1 mRNA downstream 39436 14100397 ~ 14104226 (-) True sdf4
XM_043224794.1 mRNA downstream 49226 14085586 ~ 14094436 (-) True ctdsp2
XM_043224173.1 mRNA downstream 103584 14031726 ~ 14040078 (-) True tmem240a
XM_043224172.1 mRNA downstream 103586 14031726 ~ 14040076 (-) False tmem240a
XM_043224171.1 mRNA downstream 114494 14025634 ~ 14029168 (-) True LOC122328469
XM_043225302.1 mRNA upstream 6593 14150523 ~ 14196687 (-) True syt6a
XM_043225463.1 mRNA upstream 80658 14224588 ~ 14233051 (-) True zbtb48
XM_043225081.1 mRNA upstream 113920 14257850 ~ 14272460 (-) True avpr2aa
XM_043224951.1 mRNA upstream 143031 14286961 ~ 14293566 (-) True idh3g
XM_043224624.1 mRNA upstream 285042 14428972 ~ 14524636 (-) False lrp1ab
TU233040 other downstream 861335 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 926254 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2219012 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2342030 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2398267 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 183036 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 437164 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1203487 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1555339 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1555339 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile