RNA id: TU233836



Basic Information


Item Value
RNA id TU233836
length 934
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G157906
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14326384 ~ 14461017 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


agttttattttttGACTTTTTAAACCAAAAGATTTATTGAAGACTTTAACAAAAACTCGCTGAGCTGACAGGTCTGAGGAACGTCCAAAACAGTTCACATGGTCGTCAAGACCAGGATGCTTCTGCAGAACCAGGTGATGGAAAACCAAATCCTCATTCAGAAAGCAGGCCTCACAGATGGCGAATGAGTGGAGCTTCAGTTGGGCTTCCAGCAGACTCTTGCTGAGGAGATTGAAGTGGAGGAGCACTCTCAGCTTCAGCAAACAGGGTCCAGTTTACTTTGACCTCTGCCTCATCTTTCTCCTTTTACGCTTcagccttaaaataaataaaaaaaaaaaaaaaaatcactccaTGCATATTTCAATGGGAAAGAACGCAATATGCAGCCTCTTGTGTTCCAAACTTACCTGCGCATGCGCTTCTTTCGCCACTGCGAGAAGagtaaaagcattaataaacttgaattgatcAGGCagttaaaaacaattacagaTTAACGCATGCGCATTCGCATCTGCCGCCATTGGCTTCATTTTCTCAATGCAGCATGGCCCTTAGGGCGGAATAGTTAAACCAAAAAATGATTTCGCACTTAAAATTCGTCAACGTAAATCAAGAATTACAAAGAAGCAATCGACATGCAGCGACTGCAAACACTCTGGCCAATAACCCTTGCGACAAACTGTTAGCAGACTAGCACAGTAGGCCCGATAATATACCACGAAAATGTAACATTGAAGGTCAGTGGTTTTATTCTACATAGTTAATAAGATTACTGTAAAATATCCAGTTAAACAAGTAGTTTTAGCGTAATTAACACCATATTAGCCATCAACATGCTAGCAAGGCTAGCCAGACAGCGAGACactcacatatacacatactaatcacataaaaaaattacttaccTTCGCTCTCATGATGAGAAGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233861 lncRNA downstream 6091 14366559 ~ 14367629 (-) True G157920
TU233853 lncRNA downstream 14690 14357040 ~ 14359030 (-) True G157915
TU233829 lncRNA downstream 30450 14302872 ~ 14343270 (-) True G157901
TU233833 lncRNA downstream 48073 14324716 ~ 14325647 (-) True G157905
TU233804 lncRNA downstream 129765 14242581 ~ 14243955 (-) True G157885
TU233937 lncRNA upstream 253581 14651424 ~ 14729662 (-) True G157966
TU233962 lncRNA upstream 287047 14684890 ~ 14702112 (-) False LOC122328902
TU233965 lncRNA upstream 287047 14684890 ~ 14702112 (-) False LOC122328902
TU233980 lncRNA upstream 287047 14684890 ~ 14691315 (-) True LOC122328902
XR_006247854.1 lncRNA upstream 432421 14830264 ~ 14830849 (-) True LOC122328920
XM_043224951.1 mRNA downstream 80154 14286961 ~ 14293566 (-) True idh3g
XM_043225081.1 mRNA downstream 101260 14257850 ~ 14272460 (-) True avpr2aa
XM_043225463.1 mRNA downstream 140669 14224588 ~ 14233051 (-) True zbtb48
XM_043225302.1 mRNA downstream 177033 14150523 ~ 14196687 (-) True syt6a
XM_043224788.1 mRNA downstream 269494 14100397 ~ 14104226 (-) True sdf4
XM_043224624.1 mRNA upstream 31129 14428972 ~ 14524636 (-) False lrp1ab
XM_043224623.1 mRNA upstream 31129 14428972 ~ 14524636 (-) True lrp1ab
XM_043225371.1 mRNA upstream 156971 14554814 ~ 14563800 (-) True senp1
XM_043224161.1 mRNA upstream 166621 14564464 ~ 14569658 (-) True LOC122328465
XM_043224258.1 mRNA upstream 172504 14570347 ~ 14589622 (-) False fitm2
TU233846 other downstream 42936 14326966 ~ 14330784 (-) True G157909
TU233040 other downstream 1091393 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 1156312 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2449070 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2572088 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU233895 other upstream 183251 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 949574 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1301426 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1301426 15699269 ~ 15717250 (-) False LOC122329227
TU234366 other upstream 1610263 16008106 ~ 16008915 (-) True G158231

Expression Profile