RNA id: TU233841



Basic Information


Item Value
RNA id TU233841
length 497
lncRNA type inter_gene
GC content 0.37
exon number 3
gene id G157906
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14326384 ~ 14461017 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tttttttctttGACTTTTTAAACCAAAAGATTTATTGAAGACTTTAACAAAAACTCGCTGAGCTGACAGGTCTGAGGAACGTCCAAAACAGTTCACATGGTCGTCAAGACCAGGATGCTTCTGCAGAACCAGGTGATGGAAAACCAAATCCTCATTCAGAAAGCAGGCCTCACAGATGGCGAATGAGTGGAGCTTCAGTTGGGCTTCCAGCAGACTCTTGCTGAGGAGATTGAAGTGGAGGAGCACTCTCAGCTTCAGCAAACAGGGTCCAGTTTACTTTGACCTCTGCCTCATCTTTCTCCTTTTACGCTTcagccttaaaaaaataaataaataaaaaacccagcttaaaacaacagcatttcaaTTGGTGAATATTGGCCAAAAGGAATTGCATGATATAGCAATGCAATATAgcaattacaatatattaaatactaaaatattgcTGTACAATAtgctatattaaataatataataatatagcaaTAGTTTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233833 lncRNA downstream 737 14324716 ~ 14325647 (-) True G157905
TU233804 lncRNA downstream 82429 14242581 ~ 14243955 (-) True G157885
TU233794 lncRNA downstream 89370 14236352 ~ 14237014 (-) True G157880
TU233765 lncRNA downstream 100990 14222809 ~ 14225394 (-) False zbtb48
TU233789 lncRNA downstream 182454 14143662 ~ 14143930 (-) True G157875
TU233937 lncRNA upstream 237424 14651424 ~ 14729662 (-) True G157966
TU233962 lncRNA upstream 270890 14684890 ~ 14702112 (-) False LOC122328902
TU233965 lncRNA upstream 270890 14684890 ~ 14702112 (-) False LOC122328902
TU233980 lncRNA upstream 270890 14684890 ~ 14691315 (-) True LOC122328902
XR_006247854.1 lncRNA upstream 416264 14830264 ~ 14830849 (-) True LOC122328920
XM_043224951.1 mRNA downstream 32818 14286961 ~ 14293566 (-) True idh3g
XM_043225081.1 mRNA downstream 53924 14257850 ~ 14272460 (-) True avpr2aa
XM_043225463.1 mRNA downstream 93333 14224588 ~ 14233051 (-) True zbtb48
XM_043225302.1 mRNA downstream 129697 14150523 ~ 14196687 (-) True syt6a
XM_043224788.1 mRNA downstream 222158 14100397 ~ 14104226 (-) True sdf4
XM_043224624.1 mRNA upstream 14972 14428972 ~ 14524636 (-) False lrp1ab
XM_043224623.1 mRNA upstream 14972 14428972 ~ 14524636 (-) True lrp1ab
XM_043225371.1 mRNA upstream 140814 14554814 ~ 14563800 (-) True senp1
XM_043224161.1 mRNA upstream 150464 14564464 ~ 14569658 (-) True LOC122328465
XM_043224258.1 mRNA upstream 156347 14570347 ~ 14589622 (-) False fitm2
TU233040 other downstream 1044057 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 1108976 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2401734 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2524752 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2580989 11745262 ~ 11745395 (-) True LOC122329329
TU233895 other upstream 167094 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 933417 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1285269 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1285269 15699269 ~ 15717250 (-) False LOC122329227
TU234366 other upstream 1594106 16008106 ~ 16008915 (-) True G158231

Expression Profile