RNA id: TU234037



Basic Information


Item Value
RNA id TU234037
length 353
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G158019
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15295888 ~ 15296636 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aaactcTCATGAAAAATCCTTGTGATAATTCTTTATTTCTGCAGCCATTAAAGCTTCTAGTGTGTATTCTGGGTGGAAGGGTTTTGTGTGTTTCGCTGTGGGGTGAGGTGCTGTGTGTGCTGGGATTGAGATTTAATCTAGCAGATATTTAGTCATGCACATAATGACCTTCACTGGATTTTTGGATTGCAGCTCAAAACGGCAGTGTTCTCACAAGGTGCCAACTAATAATGCAGATGATGTTTTATAACACCCTCACATATGTGGTCTTCAGAAAGTTGTCCTGAATAAAATCCCAATGAAGAATCCTGCAAACATATGTAccctgtatatacacacacttccCAGAATCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234028 lncRNA downstream 91938 15202366 ~ 15203950 (-) True G158014
XR_006247855.1 lncRNA downstream 106250 15188148 ~ 15189638 (-) True LOC122328921
TU234018 lncRNA downstream 247601 15047173 ~ 15048287 (-) False LOC122328913
TU234007 lncRNA downstream 450210 14836361 ~ 14845678 (-) True G157999
XR_006247854.1 lncRNA downstream 465039 14830264 ~ 14830849 (-) True LOC122328920
TU234059 lncRNA upstream 179851 15476487 ~ 15477769 (-) True G158024
TU234264 lncRNA upstream 307212 15603848 ~ 15607080 (-) True G158174
TU234271 lncRNA upstream 325306 15621942 ~ 15702230 (-) True LOC122329227
TU234287 lncRNA upstream 384250 15680886 ~ 15681872 (-) True G158188
XR_006247888.1 lncRNA upstream 403135 15699771 ~ 15717244 (-) False LOC122329227
XM_043224313.1 mRNA downstream 98427 15195117 ~ 15197461 (-) True LOC122328567
XM_043224980.1 mRNA downstream 110742 15165542 ~ 15185146 (-) False LOC122328902
XM_043224995.1 mRNA upstream 20091 15316727 ~ 15324022 (-) False LOC122328911
XM_043224993.1 mRNA upstream 20091 15316727 ~ 15324022 (-) True LOC122328911
XM_043224966.1 mRNA upstream 42423 15339059 ~ 15347198 (-) True LOC122328900
XM_043224960.1 mRNA upstream 50781 15347417 ~ 15474377 (-) True magi3a
XM_043224961.1 mRNA upstream 50781 15347417 ~ 15474376 (-) False magi3a
TU233895 other downstream 706295 14581094 ~ 14589593 (-) True fitm2
TU233846 other downstream 965104 14326966 ~ 14330784 (-) True G157909
TU233040 other downstream 2013561 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 2078480 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 3371238 11922844 ~ 11924650 (-) True G156985
XR_006247853.1 other upstream 50781 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 402633 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 402633 15699269 ~ 15717250 (-) False LOC122329227
TU234366 other upstream 711470 16008106 ~ 16008915 (-) True G158231
TU234433 other upstream 847197 16143833 ~ 16169834 (-) True G158288

Expression Profile