RNA id: TU234287


Basic Information

Item Value
RNA id TU234287
length 914
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G158188
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15680886 ~ 15681872 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtaaatgcagaaatgaaataaagcacaattaaattgaattaaattaaatcgaattaaaataaattacattttaataaacaacagctttaattttaaatgtaattaagatCTGATGTTAGACattatttgaaactttttttgtcatttataaaaagcgtgtacacatttaaaaagtcattagtTAAACTGTGGATTCTTATGCCCTGACAGGAAAATACACATTCACAATAATAAGTTTAACTGGCAGATGAAAATCAATCCAACGCTCACCCTAATTCGTGGTAGTGCTCATTCAATTAGCTCCTGTGTCTCTGAGAACTGGAGGAAGAGGATGACAGTGCGTTTAAGATCATTTAAGCTGTATCACAACAAGTGAGCTTTATGcagttaacattttaacactCGCCTGTTGGCTGGAGTTGGCGGAGGGTGGTGTAACTACATTTTGCTCCACTAGAGGGTTCAGGGGGGCGGAGCCTGGCAGGTGGGTGGCACGCCAgtatatatctaaatattcGGCCAGGTGTTCGCAGGCATCCTCTAACTGATTCTCATCCAGTATAACATCAAACATTTCCTAATGCAAGATAAACGCAGCGAGGATGGTGGGCACTGAGCTAGTTTATCTCCAGCCATCATTTGCACGTTGAGATGTTTGCTTTGAGATTTCCCTCTGGATTTAACGAGTCTTTGAAGAACCTGGGGTAGAATGAGTAACACTGAGAAAATGAGCGACACGCTTCTTCAGGGAAATCTGAACCGACCTCTATAGCTTAATCATTTCAATAAGcaaaacaacacttttaacACTGTGGACTTATAAGTAACACTAAGATAGTCCAGCAAGGACtgaaatgtttgatattttgtgtgtgcataatCTCACTTTTTTGCTAGTGCACTTTAGTTTTTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU234264 lncRNA downstream 73806 15603848 ~ 15607080 (-) True G158174
TU234059 lncRNA downstream 203117 15476487 ~ 15477769 (-) True G158024
TU233990 lncRNA downstream 342043 15210228 ~ 15338843 (-) True G157984
TU234037 lncRNA downstream 384250 15295888 ~ 15296636 (-) True G158019
TU234028 lncRNA downstream 476936 15202366 ~ 15203950 (-) True G158014
XR_006247888.1 lncRNA upstream 17899 15699771 ~ 15717244 (-) False LOC122329227
XR_006247887.1 lncRNA upstream 17899 15699771 ~ 15717244 (-) False LOC122329227
TU234308 lncRNA upstream 46282 15728154 ~ 15789331 (-) True G158198
TU234328 lncRNA upstream 130409 15812281 ~ 15812927 (-) True G158208
TU234357 lncRNA upstream 282881 15964753 ~ 15965763 (-) True G158227
XM_043224806.1 mRNA downstream 21479 15622481 ~ 15659407 (-) False adcy6b
XM_043224803.1 mRNA downstream 22939 15622481 ~ 15657947 (-) False adcy6b
XM_043224802.1 mRNA downstream 22939 15622481 ~ 15657947 (-) True adcy6b
XM_043224804.1 mRNA downstream 22958 15622481 ~ 15657928 (-) False adcy6b
XM_043224800.1 mRNA downstream 22962 15622481 ~ 15657924 (-) False adcy6b
XM_043225119.1 mRNA upstream 37386 15719258 ~ 15724002 (-) False dtx3
XM_043225121.1 mRNA upstream 37386 15719258 ~ 15724002 (-) False dtx3
XM_043225120.1 mRNA upstream 37386 15719258 ~ 15724001 (-) False dtx3
XM_043225125.1 mRNA upstream 37386 15719258 ~ 15724001 (-) False dtx3
XM_043225126.1 mRNA upstream 37386 15719258 ~ 15724001 (-) False dtx3
XR_006247853.1 other downstream 206509 15347417 ~ 15474377 (-) False magi3a
TU233895 other downstream 1091293 14581094 ~ 14589593 (-) True fitm2
TU233846 other downstream 1350102 14326966 ~ 14330784 (-) True G157909
TU233040 other downstream 2398559 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 2463478 13141078 ~ 13217408 (-) True G157367
TU234273 other upstream 17397 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 17397 15699269 ~ 15717250 (-) False LOC122329227
TU234366 other upstream 326234 16008106 ~ 16008915 (-) True G158231
TU234433 other upstream 461961 16143833 ~ 16169834 (-) True G158288
TU234490 other upstream 558938 16240810 ~ 16243395 (-) True tac3a

Expression Profile