RNA id: TU234433



Basic Information


Item Value
RNA id TU234433
length 617
RNA type TUCP
GC content 0.59
exon number 2
gene id G158288
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 16143833 ~ 16169834 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGGGAGGATGGTGAACTGCTCCTCTGTCTGTGGGCTGCCCAGGTCTTGGCTGCTCCTGGCGGGTGGAGGTGGGGGTTTGCCCTCCAGTCTGCGGACCTGCCGCTCTCCCTTGGCCGTCCCCGTTGCTCCGGCGCTCAGCTTACGCACAGGATTGGTCAGCCATTTCTTCAGGGTGCTGACAGAGCGACGGGAGCCTGGGGAGTTTGGGGCTGAACTACCCGAAGCCTGGGGCGGCAGAGAGGCCACCGAGGTGGAGATACTGCCCTCACTGCCAGCCAGGACTTTCCGAAACAAGTGGTGGCAGGCGCAGCCCCGATGATGGTGGCCCCCCTTCATGGTCTACCCCAGTCGCTGACCACAAGATTAACAGGCATGGGCATGGCACATCACACGCGCACGTTCACGCCGGGGATATCCCTGCAATGGTAATTCCAAAGAGGCGTGGGGAAGAACCTCAAAACAAATCCCAAGAGGAGCGAAAGTCCTGCTAGTCTGTTAGGGAATCATACACCATCCAGATATCCAGTCTCGGGCTGTCACTGCACAAGACGAGTCAACAGCAGGCAAAAGAACAGCTCAGTCTCCCTGTTTTTCCTCCCTCCTGCTCTCACTGTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234428 lncRNA downstream 25619 16117881 ~ 16118214 (-) True G158284
TU234426 lncRNA downstream 41619 16101625 ~ 16102214 (-) True G158282
TU234368 lncRNA downstream 134918 16008106 ~ 16008915 (-) False G158231
TU234357 lncRNA downstream 178070 15964753 ~ 15965763 (-) True G158227
TU234328 lncRNA downstream 330906 15812281 ~ 15812927 (-) True G158208
TU234492 lncRNA upstream 77182 16247016 ~ 16247293 (-) True G158333
TU234496 lncRNA upstream 185535 16355369 ~ 16358705 (-) True G158336
TU234531 lncRNA upstream 247091 16416925 ~ 16439280 (-) True G158353
TU234534 lncRNA upstream 251685 16421519 ~ 16439280 (-) False G158353
TU234561 lncRNA upstream 254130 16423964 ~ 16424362 (-) True G158377
XM_043224262.1 mRNA downstream 17422 16118392 ~ 16126411 (-) True ankrd33aa
XM_043224814.1 mRNA downstream 28549 16102408 ~ 16115284 (-) True acvrl1
XM_043225249.1 mRNA downstream 44074 16083732 ~ 16099759 (-) True acvr1ba
XM_043224111.1 mRNA downstream 120463 16021317 ~ 16023370 (-) False dnajc22
XM_043224110.1 mRNA downstream 120464 16021317 ~ 16023369 (-) True dnajc22
XM_043224214.1 mRNA upstream 19597 16189431 ~ 16192678 (-) True sp5l
XM_043225544.1 mRNA upstream 52975 16222809 ~ 16234574 (-) False b4galnt1a
XM_043225543.1 mRNA upstream 52975 16222809 ~ 16234574 (-) True b4galnt1a
XM_043224075.1 mRNA upstream 71228 16241062 ~ 16243281 (-) False tac3a
XM_043225148.1 mRNA upstream 89241 16259075 ~ 16331672 (-) True znf385a
TU234366 other downstream 134918 16008106 ~ 16008915 (-) True G158231
TU234273 other downstream 426583 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other downstream 426583 15699269 ~ 15717250 (-) False LOC122329227
XR_006247853.1 other downstream 669456 15347417 ~ 15474377 (-) False magi3a
TU233895 other downstream 1554240 14581094 ~ 14589593 (-) True fitm2
TU234490 other upstream 70976 16240810 ~ 16243395 (-) True tac3a
TU234495 other upstream 187818 16357652 ~ 16358705 (-) False G158336
TU234864 other upstream 1006818 17176652 ~ 17179779 (-) False slc48a1a
TU234899 other upstream 1169433 17339267 ~ 17343385 (-) True G158609
TU235255 other upstream 1876104 18045938 ~ 18047878 (-) False march9

Expression Profile