RNA id: TU234898



Basic Information


Item Value
RNA id TU234898
length 425
lncRNA type read_through
GC content 0.34
exon number 2
gene id G158608
representative False

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 17311328 ~ 17338919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttttattctaaattttgttttatacttaaggtttagtataaaaaaaagttaagtgcACCACATATTCATTGGAGACCATTTTGTCATGTAGCAAACTAGGAAGGACCTCGGTTCCTTGATGCTGCAGTGTGCATCCGTTCTAACCCATCAcaatctttttatattatatatatatatatatatataaaaaaaaatcaagaggGTTCCCTGAACTGTAGTGCCCACATAGACGTATACCATCCATGACTGTCATGGTATTGAGGCTCAAGATAAGCAGTGTATCCGCTACAttgcatacacaaacacacggtGCCACATGCCATGATAAAATGCTGCGCTAAGTTGAAACGGATATTGAGTTCTGAAGGCTTTgccctcatgtttttttttttttttttttttttttttttttttttttttggaat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234890 lncRNA downstream 19785 17289971 ~ 17291543 (-) True G158605
TU234874 lncRNA downstream 85759 17152825 ~ 17225569 (-) True G158591
TU234861 lncRNA downstream 228644 17082207 ~ 17082684 (-) True G158587
TU234860 lncRNA downstream 228776 17082207 ~ 17082552 (-) False G158587
TU234706 lncRNA downstream 582985 16728101 ~ 16728343 (-) True G158484
TU234920 lncRNA upstream 44423 17383342 ~ 17386554 (-) True G158628
TU234925 lncRNA upstream 55102 17394021 ~ 17395422 (-) True G158632
TU234910 lncRNA upstream 74784 17413703 ~ 17422305 (-) False coq10a
TU235009 lncRNA upstream 407611 17746530 ~ 17748502 (-) True G158706
XR_006247788.1 lncRNA upstream 460923 17799842 ~ 17844102 (-) True LOC122328377
XM_043223974.1 mRNA downstream 8763 17294178 ~ 17302565 (-) True csrnp2
XM_043225102.1 mRNA downstream 53164 17214599 ~ 17258164 (-) True itga5
XM_043225101.1 mRNA downstream 126943 17176625 ~ 17184385 (-) False slc48a1a
XM_043225100.1 mRNA downstream 131496 17176625 ~ 17179832 (-) True slc48a1a
XM_043225098.1 mRNA downstream 134839 17171113 ~ 17176489 (-) True hrct1
XM_043225031.1 mRNA upstream 5183 17344102 ~ 17350948 (-) True bin2a
XM_043225030.1 mRNA upstream 15228 17354147 ~ 17361384 (-) True racgap1
XM_043224254.1 mRNA upstream 78703 17417622 ~ 17422517 (-) True coq10a
XM_043225107.1 mRNA upstream 94813 17433732 ~ 17438013 (-) True tmed4
XM_043225104.1 mRNA upstream 434486 17773405 ~ 17777920 (-) True LOC122328974
TU234864 other downstream 131549 17176652 ~ 17179779 (-) False slc48a1a
TU234495 other downstream 952623 16357652 ~ 16358705 (-) False G158336
TU234490 other downstream 1067933 16240810 ~ 16243395 (-) True tac3a
TU234433 other downstream 1141494 16143833 ~ 16169834 (-) True G158288
TU234366 other downstream 1302413 16008106 ~ 16008915 (-) True G158231
TU234899 other upstream 348 17339267 ~ 17343385 (-) True G158609
TU235255 other upstream 707019 18045938 ~ 18047878 (-) False march9
XR_006247822.1 other upstream 892724 18231643 ~ 18235536 (-) False hnrnpa1b
TU235534 other upstream 1408472 18747391 ~ 18754712 (-) True G159076

Expression Profile