RNA id: XM_043223973.1


Basic Information

Item Value
RNA id XM_043223973.1
length 1977
RNA type mRNA
GC content 0.41
exon number 8
gene id tmem269
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 15479040 ~ 15490268 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCATTTCCGGTGGAATATTCCAGCGAATCCTGCAATGCCTTTAAAAAGAGACGCGCTGAAATTACGCTGAAAAGCGTTGTCTGTGACAGAAAGGTGCagtctgtaaaataaatgttatcttTGTCCTTTTTTTGCGGACCCAAAGTAACTACTAAATGTGAATTATAAATACTGTGTCGTCGAAGCTGACCACCAAACGCCGTCATTTGTCTGCGTTAATTTTCTCATCGTTCTGTGATTGACATCGAAGttctgtttgacATTGAGAAATCTTTTGGCCATCATGATCCTCCTGACTCCCACATCTGatgaaGAGTCGCTTGAAATCAACTGGCTTTGGAATCACATCAAGTTCAGGTTACAAACACAATAGTAGGAACCCTTCCTTGAAGCCTTTTTCCAGGACGCTAACAAACTGCTCCTGAACGAACGAGCTAACTGGGTGCATCTAAAGGAGTTTGCCCGTAAAAATGCTGCCAACGCTCTTTCTGTTGCCAACATGCTCATGGGCATGGCCTCAATCCTCTGCAGTCTCAATGGCCATCATCATGCCGCGTGCTGGCTGGTTCTGATCGGTTACCTGCTGGATTTGGCAGATGGAGCAGTTGCTAGGCGACTAAACGCATGTTCTGCATTGGGTGCAAAGTTGGACGATTTTGCTGATTTCACAACATTTGGAATAGCAACATCTCTCATCTTAAGGACACCCAGTCTTTTGGATAACATCCTGTGCATGTTGTATGTGATGTCTGTCTATACTCGTCTCTGCTTCTTCTCTAGCGGAATCCCATTCATGTACCGTGGCTTACCATGCATCTACTCCTCTGCCATCctggtgtgtgtttctctgctgACCGGAGGAAATATGGCAGTACTGAGAATCCTAGCAGTGGCCATGATTCTCTTCATGGTCAGTCAGAACTTCTACCCACATGACAGAGTGCTGGAGTCTCAGGCCTGGAAGAAGGTGGTGTACATCGGAGgAGTTGCCATGGTGTTttgctcctccttccctccagcgTGTGTTTACTACTTGTTATGGTCAATTTCCTACATATTGTTTCCAACAACTCTGTGGAGCAGCAAAGTGTAAAAGGTTAAGGAGTCCCTTTCTGCTTCCTGTTAAGGAATATCCAACCAATTTAGAAACCTGGAAAAcaatttttaagtcatttttgttttgaagtgatGAACTTCATGAAATCGACATGATCTAGGAGGCTTTCGGACATTTCTTGCTGTTGTTTCATCTCTAAGGATGAGAAACGCTCTTCACCTCTGCTTCATGTATTGTCATGTGTTTGCATGGCATGTTGACAGAGACACAGTAGATGGTCttgcatacagtatgtgtggTGCTTGTTGCACAGTTCTGCCTAAATGAATCTAAAAGGCAAAgtagaaattgtaaaaaaaaaaaaaaattgctgtggAATTTATACTTGTAGTATTACTGCTTTTTGGttaagaaaccaaaaaaatcaaacagtgTTTTCACAACTCAATCATAATCAAATTTTCtgcttaattatttaaaaaaataatgaccatAAGAGAATTTTATGCATATGATCTGTGTAATTTCATGTAAAAACACTCCAGTATGATTAAGGTAGTGGCTATTATCATATACTGTAGCTTATCTTTTGCCTGGTTAATGTGTGACTTGTCCCATAGAATATTAGGTGGGCCTTCGAAACAAATGCCTCGTAACAGTATGACGgttgatttaattttgataaATGAGTTTATTTGTACCATTTAACCTCTGTTTTAAGGGGTTCTGCATCCTGACTCACGGTTGTCagtaattgcttgtgtttagcGAATGATCTTCCATTGAGTTTGCTATGTACTGTTCACGGGTTCAGTGGAAAGTTGATACCCTGCAACATAACAGTATTGAGgcattattttgtgttctgtgCACCACTTGTGGttgcatttgattaaaatgtagtggtgttaagaaaaaaa

Function

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0016780 phosphotransferase activity, for other substituted phosphate groups molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU234059 lncRNA downstream 1271 15476487 ~ 15477769 (-) True G158024
TU233990 lncRNA downstream 140197 15210228 ~ 15338843 (-) True G157984
TU234037 lncRNA downstream 182404 15295888 ~ 15296636 (-) True G158019
TU234028 lncRNA downstream 275090 15202366 ~ 15203950 (-) True G158014
XR_006247855.1 lncRNA downstream 289402 15188148 ~ 15189638 (-) True LOC122328921
TU234264 lncRNA upstream 113582 15603848 ~ 15607080 (-) True G158174
TU234271 lncRNA upstream 131676 15621942 ~ 15702230 (-) True LOC122329227
TU234287 lncRNA upstream 190620 15680886 ~ 15681872 (-) True G158188
XR_006247888.1 lncRNA upstream 209505 15699771 ~ 15717244 (-) False LOC122329227
XR_006247887.1 lncRNA upstream 209505 15699771 ~ 15717244 (-) False LOC122329227
XM_043224964.1 mRNA downstream 4650 15349721 ~ 15474390 (-) False magi3a
XM_043224963.1 mRNA downstream 4653 15349721 ~ 15474387 (-) False magi3a
XM_043224960.1 mRNA downstream 4663 15347417 ~ 15474377 (-) True magi3a
XM_043224961.1 mRNA downstream 4664 15347417 ~ 15474376 (-) False magi3a
XM_043224962.1 mRNA downstream 76990 15347417 ~ 15402050 (-) False magi3a
XM_043224314.1 mRNA upstream 12162 15502428 ~ 15506646 (-) True si:dkey-205h13.2
XM_043225304.1 mRNA upstream 20689 15510955 ~ 15598026 (-) True hspg2
XM_043225288.1 mRNA upstream 121349 15611615 ~ 15620804 (-) True galnt6
XM_043224806.1 mRNA upstream 132215 15622481 ~ 15659407 (-) False adcy6b
XM_043224803.1 mRNA upstream 132215 15622481 ~ 15657947 (-) False adcy6b
XR_006247853.1 other downstream 4663 15347417 ~ 15474377 (-) False magi3a
TU233895 other downstream 889447 14581094 ~ 14589593 (-) True fitm2
TU233846 other downstream 1148256 14326966 ~ 14330784 (-) True G157909
TU233040 other downstream 2196713 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 2261632 13141078 ~ 13217408 (-) True G157367
TU234273 other upstream 209003 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 209003 15699269 ~ 15717250 (-) False LOC122329227
TU234366 other upstream 517840 16008106 ~ 16008915 (-) True G158231
TU234433 other upstream 653567 16143833 ~ 16169834 (-) True G158288
TU234490 other upstream 750544 16240810 ~ 16243395 (-) True tac3a

Expression Profile