RNA id: XM_043224049.1


Basic Information

Item Value
RNA id XM_043224049.1
length 3455
RNA type mRNA
GC content 0.45
exon number 11
gene id tmem201
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9124000 ~ 9135259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATTCTGTACAAAGTGAGAGGCATGTATGAAtcggttgttttgttttgaagataATGATTAAGTATTGTCAGCATACGTGCTTTTAAGCACGCTATCTTGActatgatttaatattttgattactGATACATATTTTCTACACAAAACAAAGCGGACTGAAAGATGAGAATCCATTGTTATAgggatttttaattattatttctattcttGTAATGTCTTCGTAATTGCTTGTGAATGGCTGTTACATGCGTTGCCTCAAGAGGGCAGATTTATGCCATATAAACCTGATTCAGGTCATTTTCagtcaagattttatttaatgaaggcACGACGTATAGCAGTAATTACAGCAAAGTACGTTCTTGCAATGCAACTCTAAAAacgaaatgaaatgcaaaatgtacaaataataaaaccgatgtaaaataataatgaccGTGAAACAGGTATGTAGTgtacaaaaatactgtacaaaatattttacatttaaaaacagaacgTATGCCTGTTATTACATTGCTATACTTTATAACGttattttgactattttatattttatgtgtatagttaacaaataattattttactctGTATTATTTCTTTCGCGTGGAAGggcaacttttattttgacagctcTTAATAACGCTCTCATGACCTGGATATGGCCATGTTGTAGATTGATGCGCGCTTCTGTTGCCGCATGCACTACTCCAGCGCGTGGCTTCTTTTGAATAACACTACAGTCAATAACCCGTTTTGCAATGGAAGCGTTGAACCAGATATTACTACAGTACCCGCCACTTGTAGTTGGAGGCGTCGGAGCAACGGCGATAGCCGCAGGAGGAGCGCTGATCTACAGAATTGCAACCAGGAAGAAACCAAGTCATGTCAAAGTGAATTGTTGGTTCTGCAACCAGGACACAATTGTCCCCTATGGGAACAGAAACTGCTGGGATTGTCCATACTGTGAACAGTACAATGGCTTTCAGGAGAACGGGGACTACAACAAACCCATTCCTGCTCAGTACATGGAGCATCTCAACCATGGCATTTCGGCCGGTGTCCCGGAGTCTCCGAAGACTCTGCAGTGGGTCAACTGCCAAATGCTTCTGTGCAAGAAATGCAACAGCCACCAGACTCTGAAGATTAAGCAGCTGGCCTCGTTCATCCCCAGGGATGATGAAAACTATGATGAGGAGATTGAGGTATATAAGCACCACCTTGAGCAGACCTACAAGTTGTGCCGGCCGTGCCAGACGGCAGTGGAGTACTACATCAAACACCAGAACCGACAGCTGCGGGCTCTGCTCTTCAACCACCAGCTCAGACGCAGTCGGGATGCTGATAAAGCCTTTATTAAGAACACCTACTGTCTCACCACACCAGCCTGGTTGATCTTGCTCAGAGTCCTTGCGTTTCTCGCCTGTGCCTTCCTTGTAGCTGTGGCTTTGTCTGGATCTGGAGATGTGGTCTCCTCCATCTCGCAGGCATTGAGCGGAGGAGTTAACCCACATAAACGCCCCCTCCAAAATGACAGTGAAAGCAAGGCTGAGGAGGGCAGCATGATGTGGGATGATCTGGTAGGCCTTCTGCCAGAAAAGGCTGTGGAGAACGCTCGACTCGTCTGGCAGTCCGGAAGCGACCATCAGATGGCTGTGGCTTCTGTTGGTCTCCTAACTTGCATCACAGGTGTCTTAATGGCAGGACCTGTCagATTGAGGAGAATTGACGCTGTGGCCTCTGTTCTTTGGCTCCTGGTGATATGTTTTTACCTGGCTGAGTTTTACCTCAAGAAGGACATCCCTGATTGGTTGGAAACGGTCAAGTTGGGCATCACGTCTGTGTGTTGTCTGGTGGGATTCGCTGCCGCTGTGGCAACTCGCAAATCCACGAGTCAGAGAAGAGCCAGAGGTCGCAGGTATCTGTCTGGCAGTTCTCCTGGGCCGTACTACAGTAATCACTGTCCCTCGCTGTCTGCACCTGTGTCTGCATCCTCTACCTTCATCCCAACACCTCCCTCCAACCTGTCGCAGCTGCTCATCCGCCAGCAAAGCCACAGAAGTCGCAGAGCCTTACCCTCCTCGCTGCCTGGGCGCCTCAACAGGGCCCTGTCTCTGGGAACTATCCCATCCCTCGCACGAGCAGATTCAGGTTTCCTGTTCAGTGGGAGTAGACCATCTTCACAGTGTAAAGACTCTCCTCCTTCAGATTACTATTCTCTGAAATCTGGAAGCCAGCCCTCCTCTCCTGGACCTTCTCCAACCCCTTCCGTGGCAGGATCAGTCACTTCCACCACCAGCTCTGCCAGGCAGCGCCGGCCGCTCATCAGTCCGGCCAGACTCAACATCAGCGGGCAAAAGCTGCGACTTTTTTCCTCTCCTCTGGAGCCTTTAACTTTGGCCTCGCCGCCTCAGTTTCTTTTAGAGCAAAGCCAGGTGCACAGCGGAGGATTCTTGCCTGATGTTCCACACTTCCATTCACACAATCATGATTCAGGTTCACTGATCGACGAGGGCAGTGTGTTTGAGCATGTGGAGAAGCGAATGGGCAGCTCCTCTGGGTCTTCAAACTGCCATGTAGACACAACCACAGGAAATGGAACTGAGAGCAAGCCTGGATGGAAAGGGTTTTTGGGCCTGACACTTGGGCCTGGTCTACTGTTTGCCAGCCTGACCATTAACTTGACATTCATCGGTTTCTATCTTTATTACAATTGGAGATGAGCGTATAGAAGAGACCTCAGGAGTTCAAGGTCAAACTGGGATGTACACTGGTCTTGTCACTAAATCTGGGATCTTTACAGGAAATACGTGGACAGCAGTTCCTTTGGGTGATGGCTACAACTTTATTCTTGCTGCTCAACAATTGTGGATGTAATAGTGGAGAATGAAGGAATTCTCAAACAAAAGAGAAGACCGTATCCTCTTAACTTGAGCTCTGTTACATACAGCCGAGATTCTACATTATGCCGCAAAGTATGACGTGAGCTTTgtgaaacatgtttttgtgcatgttcaatcttttcaattttttgtgtttttaaacactGGATGCTTGTTTCAGACTGAATGCTTGTGCTGTTTAGGTTAACAGAATGGTGTCTGTTGGGCACGTGATGCATCTTTACGAAACATTTATTTGACGACTTTGCCATATTGCTGTACATTTACGTGTTTCTGTTTATCCTACATCCTGAAAGGAGAATTCCATGTCATGTCATTATCGTAATGATGTGATACTATCTTGCGATATGTTTGTGTTGAGCTACTTTTGTcaaccatgtgacactgaaagaTTTGGTTTAGCAAATGTCTGTTACTGTGTCCATGGAGCCTCGGACTCCGTTTTATTATTCAACTCACTCATCATGTCAAGGTAAACAggataaattaatattttgtatataacaaTGTTTCAATTACCAGATTGAAATAAATCTCCATTGTAATTGTTA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230977 lncRNA downstream 26737 9079533 ~ 9097263 (-) False ctnnbip1
XR_006247890.1 lncRNA downstream 51056 9070384 ~ 9072944 (-) False LOC122329247
XR_006247891.1 lncRNA downstream 51062 9070384 ~ 9072938 (-) True LOC122329247
TU230942 lncRNA downstream 494897 8628699 ~ 8629103 (-) True G155933
TU230786 lncRNA downstream 498358 8624926 ~ 8625642 (-) True G155825
TU230983 lncRNA upstream 17821 9153080 ~ 9153502 (-) True G155968
TU231000 lncRNA upstream 53254 9188513 ~ 9188897 (-) True G155979
TU231104 lncRNA upstream 466703 9601962 ~ 9602477 (-) True G156051
TU231107 lncRNA upstream 472229 9607488 ~ 9607948 (-) True G156054
TU231109 lncRNA upstream 476991 9612250 ~ 9612596 (-) True G156056
XM_043224054.1 mRNA downstream 1269 9120872 ~ 9122731 (-) True foxl2l
XM_043224795.1 mRNA downstream 5928 9099273 ~ 9118072 (-) True pik3cd
XM_043224796.1 mRNA downstream 13921 9099273 ~ 9110079 (-) False pik3cd
XM_043225456.1 mRNA downstream 26698 9079532 ~ 9097302 (-) True ctnnbip1
XM_043224052.1 mRNA upstream 156 9135415 ~ 9142320 (-) True slc25a33
XM_043224458.1 mRNA upstream 60051 9195310 ~ 9209964 (-) True ccdc187
XM_043224461.1 mRNA upstream 60051 9195310 ~ 9209962 (-) False ccdc187
XM_043224459.1 mRNA upstream 60051 9195310 ~ 9207599 (-) False ccdc187
XM_043224460.1 mRNA upstream 61602 9196861 ~ 9209964 (-) False ccdc187
TU230970 other downstream 197390 8921564 ~ 8926610 (-) True sst6
XR_006247823.1 other downstream 204275 8913062 ~ 8919725 (-) False c23h1orf127
XR_006247824.1 other downstream 204275 8913063 ~ 8919725 (-) False c23h1orf127
TU230789 other downstream 495609 8625758 ~ 8628391 (-) True G155827
TU230763 other downstream 572023 8545394 ~ 8551977 (-) True G155807
XR_006247818.1 other upstream 60968 9196227 ~ 9209964 (-) False ccdc187
TU231373 other upstream 666526 9801785 ~ 9808232 (-) False hmgn3
TU231374 other upstream 666526 9801785 ~ 9808369 (-) True hmgn3
TU231375 other upstream 696869 9832128 ~ 9833633 (-) False zgc:153284
TU231376 other upstream 696869 9832128 ~ 9833682 (-) False zgc:153284

Expression Profile