RNA id: XM_043224141.1


Basic Information

Item Value
RNA id XM_043224141.1
length 2089
RNA type mRNA
GC content 0.42
exon number 7
gene id dhrs3a
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12613329 ~ 12620069 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gagagagagagagtgtctcACATGTGACAGTTCTTCATTCGTAGACCAGGAGAGCAGGACGCGTTTCCAGTTACTCAGAGAAGTCCAGCGTGCCTTTTGACAGCTGACAAGTTACAAACACACTCACGAGCTTGTTTCATTCCGCAAACTCGATAGAAAGATCGGACTATCCGAGAGTCATGATGGAGATGAAGGTGCTGGGATGCGCGTTGCTTTTTCCTGTCCAgatcttgttttgtttattgagGGCGATCGTGCGCTTCTTTACGCGCCAGAAGCGCAGAGATCTGGGCACGGATGTGGTCCTCATCACTGGAGGTGGAAGAGGAATCGGTCGTCACCTGGCTAAAGAGTTTGCCAAGCAAGGAGCAAGAAAGGTGATTTTGTGGGGCCGCacagagaaatgtttaaaagagaCATGCGAGGAGATCTCCATGACCGGAACAGAGTGCCATTACTTTGTGTGCGACGTGGGCAACAGAGAGGAAGTGTACCAGCAGGCCAAGGTGCTCAGGGAAAAGGTTGGGGATGTCACCATTCTTGTCAATAATGCAGCTGTTGTCCATGGAAAAAGTCTTATGGACAGTGACGATGACGCACTTCTGAAAACCCAGCATATAAACACACTTGGACAGTTCTGGACCACGAAAGCATTTCTGCCTCGCATGCTGGAGCTCTGCAACGGCCACGTGGTGTGCATTAACTCcattctctccctctcctccaTCCCTGGAGCCATCGACTACTGCACGTCCAAGGCCTCGTCGTATGCCTTCATGGAGAGCCTGACGCTAGGCCTGCTGGACTGTCCAGGAGTGGGCTGCACCACGGTGCTTCCCTTCCATACTGACACAGAGATGTTCCAGGGCATGAGAGTAAGGTTCCCTAAGCTATTTCCTCCTCTGAATCCTGAGATGGTGGCCGAACGCACTGTGGAAGCTGTAAGGACCAACACTGCCTTTGTTGTCCTTCCATGGACCATGCACTTTCTTGTCATCCTCAAGAGTCTTTTGCCTCAGTCTGCCCTGGAAGAGATCCATAAGTTTTCAGGAAGCTACACCTGTATGAACACATTCAAAGGACGGACTTAATCTTAGAAGCAGTGTGACTGTGAAAAATCCTCAAAACCAATTTTTTGCAAGCACTACGTCCAGGAACATCAATCTGTTGCTTTGTGGACGCAAAAAAAGACTGTGAAAGGGTCATTGGGAACAGCATATCAAGGTGGCTTGTTTTCCCAGGAACTGTTAGGTCTGCGGGTTTTACGTGGATAAATTTGGATTTGTTGCCCTATGCTGGACTGCACACAGGCGTGTAGGTGAACATGTTCTTTGAATATTGTGGTAGTAAGGAGCACAAACtgttaaagtgatagttcacccaaaaataaaaaaatgacctcATGATGTACTCGTCCTCAATCCATCCTAGGTCTATATGACTTAAACAAttagagttatattaaaaaagactGGAAGAGGCTTGacggtgagtaaatcatggggtaataataatttttgagtgaactatacTTTTAATATAGAAATGGTTCTTACAATGCTCTGAGGTTTTTATCAGGGCTTGTTTGTCCTTCTAAGATGTGACATGGGAGTTTTATAGATTTTCACTGATTTTAAgagcatttttgtaaaaaaagtcaaaatcaaGTGTCCAAACACATACggcaaatttatatatattttttaaatatgctaatatagatgttaaaatatattaacgtaaacattacatttcagtaagttttttctcatttatcttTTGGccgttttgttttatatttctatcCAAACGTCATACTgtccaaaacaaaataaaataaaataaaaaaatatatttttgcatttactcaAGTTAAGATTGTAAGCGTATGCTCTTTCTCAaagtatattttgtaatatagaTTTTGAATTTAAGCAGAACTGTTTACCGcatatattagaaatatattttggccaggggaaaaaatgtatattttttgccGTATGGgacttgtttaaatgaattccAGCATGTCTATCTTCATATCATGGTGAACTTCAAATAAACAGTAtttgagcttaaaaaaaaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232617 lncRNA upstream 226948 12353090 ~ 12386381 (+) False G157084
TU232620 lncRNA upstream 226948 12361473 ~ 12386381 (+) True G157084
TU232621 lncRNA upstream 226948 12361695 ~ 12386381 (+) False G157084
TU232604 lncRNA upstream 361351 12246217 ~ 12251978 (+) False LOC122328708
TU232614 lncRNA upstream 367228 12245874 ~ 12246101 (+) True G157081
TU232866 lncRNA downstream 108975 12729044 ~ 12787715 (+) True G157265
TU232925 lncRNA downstream 233172 12853241 ~ 12853832 (+) True G157294
TU232954 lncRNA downstream 369732 12989801 ~ 13040412 (+) True G157317
TU232968 lncRNA downstream 486391 13106460 ~ 13106957 (+) True G157326
TU232971 lncRNA downstream 494889 13114958 ~ 13115174 (+) True G157329
XM_043224142.1 mRNA upstream 968 12602134 ~ 12612361 (+) True igsf21b
XM_043225394.1 mRNA upstream 12862 12563368 ~ 12600467 (+) False arhgef10lb
XM_043224312.1 mRNA downstream 107847 12727916 ~ 12733746 (+) True lactbl1a
XM_043224598.1 mRNA downstream 114919 12734988 ~ 12769930 (+) False eif4g3b
XM_043224597.1 mRNA downstream 114920 12734989 ~ 12769930 (+) True eif4g3b
XM_043224600.1 mRNA downstream 114920 12734989 ~ 12769930 (+) False eif4g3b
XM_043224603.1 mRNA downstream 114921 12734990 ~ 12769930 (+) False eif4g3b
unassigned_transcript_2622 other upstream 1094793 11518465 ~ 11518536 (+) True trnae-uuc_33
unassigned_transcript_2620 other upstream 1097458 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2619 other upstream 1099483 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2618 other upstream 1100631 11512625 ~ 11512698 (+) True trnan-guu_35
TU231904 other upstream 1436296 11174421 ~ 11177033 (+) True G156586
XR_006247901.1 other downstream 1434295 14054364 ~ 14054500 (+) True LOC122329331
XR_006247900.1 other downstream 1436616 14056685 ~ 14056821 (+) True LOC122329330
XR_006247782.1 other downstream 1679632 14299701 ~ 14343274 (+) False si:dkey-151g10.3
TU233368 other downstream 2063921 14683990 ~ 14685316 (+) False LOC122328906
TU233419 other downstream 2092078 14712147 ~ 14714533 (+) True LOC122328914

Expression Profile