RNA id: XM_043224169.1


Basic Information

Item Value
RNA id XM_043224169.1
length 1594
RNA type mRNA
GC content 0.41
exon number 8
gene id sult1st5
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14002436 ~ 14007735 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGGAATGAGAAACGCAAATCCGTGTTTCGTTGCATGCCTGGAGTTGTTTGTGAACAATAGAAGAAGAACAATAGAGTAATTCATGACAGCTTCAAAACGTACCTGGAGCAGAAAGTAAACACTCGAAATGGTTCTTTATTATGACAGCAGCAGAGCGGATGGTGAAGTACTGGGCGAGAGTGGAGGAGTTCCAGGCGTCAAATGAGGATTTGCTCATTGCCACCTATCCTAAAGCAGGAACTACGTGGACGCAGGAAGTAGTGGATGGCATCCTGAACGAAGGAGATGCTGAAAAGTGCCAGAGGGCGCCCACTCAGGTGCGCATGCCGTTCTTGGAAATGACTGCTCCCGATGGATCCAGCTCCGGCATAACTAAACTGGAGGTTATGGATCCCCCTCGTGTTATCAAAACTCATCTTCCCGTCCAACTCGTGCCTCGTTCTTTCTGGGACGCTGGTTGCAAGGTTATATACATGGCTCGTAATCCGAAAGACACTGTGGTTTCATATTATCATTTCGACCGCATGCATCTTAACCAGCCGGAGCCTGGCCCTTGGCCACAATATCTGGAGAAGTTCATGAAAGGGCAATtgggtTGGGGATCCTGGTATGACCATGTTAAAGGATACTGGAAGGAAAGGCATAACAAGAACATCCTTTACATATTCTACGAAGACATGAAAGAGgaCCCTGTTCACGAAGTAACCCGCATTGCTCAATTTCTCAGAAGGCAGTTACCAAAAAGTACAATAGAGGATATTGTGCAGATGACCACATTTTCAGCTATGCGAGAAAACCCCATGGCAAACTACTCGAGTATCCCAGATACAATCTTTGATCGCACAGCCTCGGAGTTCATGAGAAAAGGCGAGGTTGGCGACTGGAAGAATCACTTCAGTGCAGAAGAGGACGTTGCATTTGAGGAACACTATCGCAAAATAATGTCTGATTGTCCTGTTCCAATACGGTTCACAATATGAACTAAATAATTTCCTATTATTCctatataattactattattaattttgtaatcCTATGAATGTTTCTACTTTGTACATTGCACATTGCTGGGCAacaaactgtaatattaatgtACTACTCTGGATGGGTGATAACTGTTGACTGTTCAAAGCTCTTGAATGCAGCGTAAAGTTCAAGTCCCCTTGTAAAATGATATCAGTAAACggaaattaaaataatccccagcagagggcagaaatgtaatgttttttgttttgttttgttttttttaaatttcatatttttaccgTTTTGAATAAGAAACGGGGCtcagaaataaatatgacaataataaaatagattcAAACTTTGTGACTGTAGAAAGAAATCATACAGTTGTAAAAACCGAGCAAGGCCTAAGTGACCTTTGAGACTGTGCTACCAAACCTCCAACAGATCTGCACTTGATAAAGGTTACACTTGCATGAGGTTCGCAAACGACGCaactgaaaataacaaaataaggTCAGTAATATTGATTATGTTGATTTGTTAAGATTTAGTTTCGTGTGTGTCCAATTTGACTAGTATCTATGTAAACAAATCATTGGCGCATTAAACAATTTCTCACTTA

Function

GO:

id name namespace
GO:0006805 xenobiotic metabolic process biological_process
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233703 lncRNA downstream 176847 13823993 ~ 13825589 (-) True G157826
TU233679 lncRNA downstream 229128 13772775 ~ 13773308 (-) True G157813
TU233665 lncRNA downstream 255265 13742257 ~ 13747171 (-) True G157799
TU233620 lncRNA downstream 566575 13433755 ~ 13435861 (-) True G157765
TU233023 lncRNA downstream 880410 13121813 ~ 13122026 (-) True G157365
TU233774 lncRNA upstream 52178 14057837 ~ 14075937 (-) True G157863
TU233788 lncRNA upstream 136280 14141939 ~ 14142168 (-) True G157874
TU233789 lncRNA upstream 138003 14143662 ~ 14143930 (-) True G157875
TU233765 lncRNA upstream 217150 14222809 ~ 14225394 (-) False zbtb48
TU233794 lncRNA upstream 230693 14236352 ~ 14237014 (-) True G157880
XM_043223975.1 mRNA downstream 2864 13968518 ~ 13999572 (-) True spen
XM_043225093.1 mRNA downstream 46881 13932988 ~ 13955555 (-) True epha2b
XM_043225568.1 mRNA downstream 78955 13912555 ~ 13923481 (-) False fam131c
XM_043224162.1 mRNA upstream 7588 14013247 ~ 14025526 (-) True atp13a2
XM_043224171.1 mRNA upstream 19975 14025634 ~ 14029168 (-) True LOC122328469
XM_043224173.1 mRNA upstream 26067 14031726 ~ 14040078 (-) True tmem240a
XM_043224172.1 mRNA upstream 26067 14031726 ~ 14040076 (-) False tmem240a
XM_043224794.1 mRNA upstream 79927 14085586 ~ 14094436 (-) True ctdsp2
TU233040 other downstream 720109 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 785028 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2077786 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2200804 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2257041 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 321307 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 575435 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1341758 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1693610 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1693610 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile