RNA id: XM_043224170.1


Basic Information

Item Value
RNA id XM_043224170.1
length 1245
RNA type mRNA
GC content 0.44
exon number 7
gene id tmem82
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13999885 ~ 14002685 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAAATCATACAGTTGTAAAAACCGAGCAAGGCCTAAGTGACCTTTGAGACTGTGCTACCAAACCTCCAACAGATCTGCACTTGATAAAGGTTACACTTGCATGAGGTTCGCAAACGACGCaactgaaaataacaaaataagGCATGTTGTCCTTCATTTCCCGGTTTCTGCCAAGTGTTCCTACTTGGCTAATTCCAAGTGCTATTCCTCTACATAATGTTTTACAAgGGCTCGTGGGTGCTTGTGGAATCAGTGTTCTTCGTGACCTCTTAAGAACGTACTTGTTTGTTGAGGCACAGAGTATCGCAGATCCTGAAACAGATATAAAACAACGGAACAGACTAAATGGTGGACTAACAGAGAAAATGCAGTTCTGGATCCTAACAGCGGTTCTTTCAGTTGTGGGGTCTCGCGTTGCCTCGCTGATAGTTTTGGAGTTCACTCTTAGAGCCATTTCGGCAAGGATCACAGGAAGATCGgaCTCAATTATCGACCCACTGTTACTGCTTCTCATCCAGTGCCAGTTCTCATTGGGCTGCGCATTAACCTGCAGCCTCAACTTCCTGCATGAGGGGGCGCCGCAAGGCTGGCTAAGCCTCCTCCTTTCAGTTGGACTGAGCTGGTTCTTGGCAAGCCGATGCGGCAGAGTATGGCGACATGTAAATACAATGTATCCAATACATAGCACACAGCGCTATTGTGGGCTTTGCATTGGACTATTAAACACTGCTGGTTCTATATTAGCCTGGCTCTGCAGTGCTCTAATTATAACTTTTAGTGTATCGGGAATTGCTGCTATATCAAACATAAACCAGCACTTTCTATCAACCACTGAGGCTCTGAGATTTTGGACCCCACTCACAATCTGCTACTCTCTGCTGGTTGTGTACATGAATGAGGATCGGCATCATCCGCCTGGCCAGCAGATTCTCAATACAGTTGTTGTGCGACTGGGTGGGCTTTTTGTGTTACTGATTACAGTTGGCAGCTGGTCGGATGTACTCCATGTTCTGATCTGCTTCACTGGTGAAGCTGCGTGCCTGTTTACATCTCAAGACCTTTTGGAAGCCATATATCAGAATGTCACCTACGTGCCTAGGGGCCCATTAAAAAGACCTGGAAATCGGGAAGAATTAAGGAATTTTGAAAGGAAACTGGACTAGGCTTGGATGAAAACAAACttgacctatatatatatatatatatatatatatatatatatatatatatatatatatatatata

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233703 lncRNA downstream 174296 13823993 ~ 13825589 (-) True G157826
TU233679 lncRNA downstream 226577 13772775 ~ 13773308 (-) True G157813
TU233665 lncRNA downstream 252714 13742257 ~ 13747171 (-) True G157799
TU233620 lncRNA downstream 564024 13433755 ~ 13435861 (-) True G157765
TU233023 lncRNA downstream 877859 13121813 ~ 13122026 (-) True G157365
TU233774 lncRNA upstream 55152 14057837 ~ 14075937 (-) True G157863
TU233788 lncRNA upstream 139254 14141939 ~ 14142168 (-) True G157874
TU233789 lncRNA upstream 140977 14143662 ~ 14143930 (-) True G157875
TU233765 lncRNA upstream 220124 14222809 ~ 14225394 (-) False zbtb48
TU233794 lncRNA upstream 233667 14236352 ~ 14237014 (-) True G157880
XM_043223975.1 mRNA downstream 313 13968518 ~ 13999572 (-) True spen
XM_043225093.1 mRNA downstream 44330 13932988 ~ 13955555 (-) True epha2b
XM_043225568.1 mRNA downstream 76404 13912555 ~ 13923481 (-) False fam131c
XM_043225566.1 mRNA downstream 76435 13912555 ~ 13923450 (-) True fam131c
XM_043225567.1 mRNA downstream 76440 13912555 ~ 13923445 (-) False fam131c
XM_043224162.1 mRNA upstream 10562 14013247 ~ 14025526 (-) True atp13a2
XM_043224171.1 mRNA upstream 22949 14025634 ~ 14029168 (-) True LOC122328469
XM_043224173.1 mRNA upstream 29041 14031726 ~ 14040078 (-) True tmem240a
XM_043224172.1 mRNA upstream 29041 14031726 ~ 14040076 (-) False tmem240a
XM_043224794.1 mRNA upstream 82901 14085586 ~ 14094436 (-) True ctdsp2
TU233040 other downstream 717558 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 782477 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2075235 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2198253 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2254490 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 324281 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 578409 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1344732 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1696584 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1696584 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile