RNA id: XM_043224177.1


Basic Information

Item Value
RNA id XM_043224177.1
length 9289
RNA type mRNA
GC content 0.54
exon number 30
gene id baz2a
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4303555 ~ 4327917 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTCCTCTTTCggctcgctctctttctctcctctgtgATCATGGCTGCGCTCAAACATTACCAGCCATGTTTGCAAATCTGAAACCCAAAGGTTAGCGATTCACCCGTTTATTATTTACATCGCTCGCACCCTCTTCGTCCACATCGGTCCTTCGCCGTGGCGCGCGCTCCCGGTCTCCCGCGCGGTCGGCAGATATCAAGATGGAAGCAAATAACCATTTCAACTACGGGCCTCACTCTTCTGTGTCAGCTAACTCAGGACTGAAGCATTCCTCAGGAGATTCTCTCTATACTAACGGGTCCTCCATGAGCTTCCCCCAGCAAGGGAAAAATCTGAATGGCGAAATGAATGTGAACGGCATCACTACTGCAGGTGGGAGCAGCCAGCCAGGCGCCCACCCTCCCTCTTCCTCTTATCCTCACATGAGCAACCATCACCTCCCAGGCAGCATGGGGTTTGAGTATCTGTGGGGCCAGTCTCAGTACAACCCGGCGATGGGGCCCGTCCCGCCCCACGGGTTGCACCAGAAACCCGGCTCCCAGGGTGGGATACAACCACAGCAGCCTCAGCACCACTTCCAGGGCCACGGACCGTACCAAGTCAATGGCAGTATGGGGCCGTCGCGGCAGCCTCCGGGTGCGGGGACGCAGTTTTGGGGCAGGGGAAATCCTGGGCAGCAGCCACAGCAGGGGGGATCTTCGATGCCCATCGGATATAACTCTCACGGCATGTTTGGGACGTATCCCAGCCAGGGGATCCCAGCGTCCCAGCATCACCAGCAGCCTCCGGCCTTGCAGCACCAGTCTGCAACGGCGCATCTCCAACACCATTCACACCACCACCCTCCTCaacaccagcagcagcagcattatGGTGTGATGCCTAATGGAATGCCGTATTACCAGCATCCATCACACCAGTCCCAACCACAGGCCCCAACTCAGTCTCAAGCACAGGCTCAGATGATACCACCTGCTGCGCAGAGCTTTTCGCCTCCACGAGGAAGTCCTCAGCACCATCACGTGGCCAGTGGAGGAGGCAGAAGCAGTCCCCATCAGGTTCCGGTCCCGTTGAGGACCCCTTCTGCCGTGCTTGATAGCGGTTCGCCTAAGAGCAGGGAGACGCAAGtTCCTATGAATGAGTCTGATAAAGGCTTCAATGGAGTGGAGAGAAGCTCTGTCCCACAACGTTTGCCCAAAACTGAGAGTTTTCCTGTAAAGCCCTCTGGCCCCGATTATAACCAGAGTGTGCAGGAGACGGGAGCTGCCACAAAAGAGCTTAGTTCTTCCCCTGTCTCTGGACCTCCTCCACCACTATCCAGTCCGCCTCGGAGAACACTCTCTGGGCAGGATTCACATTCTCCTTCATCTTCAGCGTTTGCATTGTCTACAGCTTCGGGCGCCGGGGCGAATGCGTCGGTGACTCCACCCTCTCCTCTTACTCCACCAAGACCTGGATTCTCTGCACCTCCATCAGCTGAAGGAACACCACCATCAATGTCTTCTCCTCGGAGCTCCAGAGCTCCACCTGTTGTTTCGAACAACCAGCCTGTGGCGTTTTCTTCAAAGACCTTGATGCATCCTCCGACGGTGCCTGCTGCGCAGCCTCTGGTGGAGGCCCAGGGCTCAAAAAGTCCGCAGGTCTCTCCAACGCCTCTGTCTTTAGCTGCATCTCCGTCTGTTGTCTCCTCTCCTCCTGCGTTGGCACCACTTAAAGGACCCCAAGAGGCATCACCTCTTACTGGCCAGAGTCCTAAACATCCCGCTGCTTCCTCGACTCCAACATCTGTTGCCGATAACGTCTCTCTCCCCGCAGTCTCTGCACTTCCGTCTGTGGCGGCCGGTTCTCCTCAAGTTGCCGCTTTGGCTTCATCTGCGCCACCTCCTGTTGTTAGCTATTCTTCTCAGGCGTCTTCAGCAAGTCTCAATGTTTCTGCTGCTCCAAATCTATCTCGTTCCCTCGTCGGTTCTGCAGCTCAGCATTCGGAGATGATGGCAAATGTAGATGTTACTTCTCACAGTCCAGGGCAGATGAGTTCTCATGGTGTATTACGGCACAGCTTTGGGGAATCGCACTCCGGTCTGATTCATGCTAAACACGAGGCCTGTGGTTCCCAGAGTAAAGTTGGAGTCGTAGCGGGCACCTCCAGCAATGAGGCTCAAGCTGAGATGCGTAAGCTGCAAGTTCATGGTCGAAACCTTGAACCGGCTTTCGTTGTTCCAAAGGAACCTGAAAGAGACACTATGGCCGTTGGCAGAAAGGACTCTAATAGTATCAGAGATCAGGCTGCCCCGAGGAAAGGAGAAAGCGAGACTTTAAATGATTCTTTTAGCACTGACACGTCACTGGACTACCCGTCCTTGGCTGAGTCAACCTACCTTGAAAGCTCAAGAGCTGAGGATGGGAGTTCAATGATGGACACTTTTGATAATTCTTATAGTCTTTCCCAGACTGGAGACCAGTCAAAGTTTACAGAAGGATCCATGATTGATGACTCCAGGGACTTGCAGGAAACTTCTTGTGAAGAAGAAAACTTGAACAGCTCCATGACCTCTACCAGCTCCACCGAGGAAGCGTCCCTCAAAGATAACATGTCTCTACTGGATGATTCGTCTTTAAACGACACCTCACAAAACAGCTCCTCCCTGCTCTCCGCATCGATTAATGCCTCTACACACTCTCTCAAAGGTGATCATATTCTTGGCAAAGAGAATGGACCTGATACTTCAGGAGGTGACAGAAGATCTGCGCTCTCTGTAATGACAGTTAAAGCGCTGCAAGCGGTCGTAAGCGGCTCTCTTGAAGGGACGACCACACACATGTCTGAAACCCTTATCGCCATGCCAACAAAAAAGCCACGGAAGCCTAAAACCCCAAAGACAACAGTTGTTACCGCTGAGATTGGCTCTCCTGATTCCAAAATCAAGAAGCGAAAGTTAACATCTGACGGCCCAAAACCAGAaaaggttagaagaagaagaaagaaaacggACGATAATTCACCGACTGcagtgaagaagagaaaaatcGTTAAAGAGGTAAAAGAACAGGAGGGCGTCCCAACTGATACCTCAACTCCTTCAGTTGCCCCGCCTCACCTTTTAGTTGATCCAGTGACCTTCGTCCATGACTTAAGCCTGACCAATAGCGAGAGCCCTATAGTCCGACCCAAGAAGATCTGGAAGCGCAAGATGAAAGAAGGGGTGAATGAGGCAAAGCTTCCCAAACCAGCCAAAGAGATCTCCGAAGGAAAAACtgaagaagatgatgatgataacagCTCAGCAGCAGGTGATACCCCAAGGCGTCGGATTGCAACTGAAGAGCAAGTCCAATTTCCTTTGCAGCATGGCTGGAGGCGAGAGATTCGAGTCCGGAGGCTGGAGGACCGCCTGAAAGGAGAGACGTGGTACTACAGCCCCTGCGGCCGGAGGATGAAGCAGTTCCCCGAGGTCATCAAGTATCTGAAAAGACATCAGGATGCTCTCCAGGGCGTTTCGAGAGAGCACTTCAGCTTCAGTCCACGCATGCCAGTGGGTGATTTCTATGAGGAGCGGGAAACCCCTGAGGGTATGAACTGGTTCCTCCTCGCCAATGAGGAAGTGCCCTCCATGATCATGGCTATAACAGGCAGACGTGGTCGTCCACCGAATCCAGACAAAGAGCCTCGTTCCCGGGGCCGCCGAGCCAGAGGAGCCCAAGGCAGACGCCCAGGCCGCCCTCCAAAGCCCAAGATGGAGGATCTGCTCAGCAAAGTAGACGCCAGGCTGCTGAAGAGACTGGAGGCGAAGGAGGATCtcacagaggaagaaaaagaaaaactgattaagatcaagaagaaaatgaagagaaagGCGAGAATGAAACGAAAGGAGGACGCCAAGAATAAAAAGATCCGGCAGGAAAAACGGAAAGCCAAACTGGAGAAAGCCAAAGAGCAGGAACAGGGTGTTGAAGACCAGTCTCAGACTCAGAGCCAGGCATCTGAAAGCCCTCTCTTAGCCGCAGAGGGACCCAAGAAGCCCGGCCGCAGGAAGAAGGTCCCAGCACCACTCGCAGCAGAGGCGCTGGACCTGGAGAAGGCCAGTCCCATCAAGAAAGTGGCCCGTGCCCGCAGTAAAGCCAAGGCTCTAGCCAAAGCCCAGGCTCAAGCAGAGGCCGAAGCACAGGCTGCTCTGGCCGCGAAGAGGCAGGCGGAGCGGAGAGCACAGGCTCAGAGACGgatggaggagaggaagagacaGCAGATGCTCTTAGAAGAGATGAAGAAGCCTGCAGAGGACATGTGTCTCCCCGACCACACGCCCCTCCCACAACTGACACGGATACCAGGGCTGGTGCTTTCGGGTTTGGCCTTCTCCAATTGTTTAAGGGTGGTTGAGTTCCTGCATGGCTACGGGAAGATTCTGGGGCTCCAGGTGCCCAAGGATATCCCCAGCCTGAGCACCCTGCAGGAAGGGCTCCTCGGCATGGAGAAGAGCCAAGGCGAGCTCCTGGATCTGCTCATTAAACTGGTGGAGGCCGCTCTGCACGATCCTGGGCTGCCCTCATATTACCAGTCTGTGAAGATCCTGGGGGAGAAGCTGGTGGATCTGGAGCTGAGCTACAGCACAGTATCTGAGGTGCTGCGGATCTTTCTGGAAGCCCATGGCTTTGAGTTGGAGGTGTGTAACAGCCTCCGTACAAAGAGCTTCCAGACCCTCAAACCCGACGTCAAAGCCTCCATACTGGCCTTCCTGGTGGAGGAGCTCAATGCCAGCAACATAATCACCAGGGAGATTGATAACACACTAGAGAATATGGCAACCTACAGGAAAAACAAGTGGATTATAGAAGGCAAACTACGCAAACTGAAGGCTGCGCTGATGCGTAAGACGGGCCGTCCGGAGGAGGAGCTGTGCTTCGAGGAGCGCCGGCGCAGTGCTCGCGTTGGAGTGGCTGAGGAGGAGAGCATCGAGGAGAGCTGTGTGCTGGAGAGAGGGAGCCGCCGCAAAGCCAAAGAGGAACCCAAACACACCGAGATTGAGAGTCCCAATACCTGCAGTGTTGCTGAGCTGGAGCGGCAGATTGATAAATTGACCAAgCGGCAGGTGTTTTTCCGTAAGAAGCTGCAGCAGTCGTCTCATTCCATGCGGGCCGTGTCTCTGGGGCAGGATCGCTACCGCCGCAGGTACTTGCTGCTGCCTTATATGGGATGTGTCCTCGTGGAGGGAGCCGAGGATATCCTGGCCTCAGATGAAGTGACAGTCAGCGATGAACCTGTGACTTACGTGAAGGTCATAACTCCGGTGAAGACGGAGGTCAAAGCTGAGCCTCCCCTCTCTCCGGCATACGCTCCATCTCTGCCCTCTTCGCCTCGAGGGTCCCAGCTGTCCCCCACAGAAGCAGACCCTCTGCCCGGCGAGGCCTCTCTGATGAGCAGCCCTCGAGGACGGGGACGCCCACGCAAGATCAAACCCGAGGTGGAGCTCCACCTGCGCACCGCCAAGAACCGGCGCCGGCGCCGCAGCAGCAGATCAGCAGCCGAGGATTCGGCTCTCGGCGCTCCTGTGCTGGACCCCGCTCGGCCCGCGTTCCAGACGCCCCTCGAGTCGCCGCCGGACGCAGAGGCCGGCAGCAGTGCGCTGATCGTCTCCGGAGCCGGTCAGGGCGAGGACAACAGCCAGCCGGAGGACAGCATGAGGGAGCAGGCGGAGAAACGAGGCCAGTGGTTCAATCTGCTTCCTAAAGAGCCGTGCGATGAGACGTCCATCTCCCAGCCGTGTGAGAACACACCCGAGCCTGGTCCATCCCCCACCGAAGACACTCCTGCACCCCTCGACAGTGACCCGCTCGCTCCGGCTCCACCACAGCCTCCACCAGAACAGATGCAGACAGaagctcctcctcctcttcctcttcctcttcctaaAGTGTGCTCCACTCCGGCTCCCAGGGCCGGGAGGAGGCGCAGGAGAAGCAGCGGGCCGTCCCGGGCTCACGCTCGCTCCAGCGCGGCAAAGAGGCGCGGAAGACCTCCCTCCAATCTCTTCCAGGAGGTTGAACTGAAGTACTTCACTCAGCTGGTGGTGAAGCCTATTCCGTTGGAAATGGTGAAGGGCTGGTGGTGGATCAAAGAACCGGAGGAGCTGACAGCCATCCTGAGCGCCCTCCACCCTCGAGGCATCCGCGAGAAAGTGCTCCACAAGCACCTCACCAAACACGTGGAGTATATGTCTGAGGTCTGCACTCGGCCCGTCACCGATCCCATCTTCCAGATGACGGTGGAGGACGGCCATGCCCTGCTGGAGGCGTCTAAACAGGCGTGGAGCGAGCAGGAGAGAGCCCTGCAGTTAGACGTCAGTGTTCTCCAGTGTGTGGAGGATCTGGAGCAGAGGGTGGTCGGAGCGGACCTTCAGCTCAAGGTGGACAAATTTCCCAGTTCGGAGAGCGAAAGTGAGGCTAGTCAGGAGTCATCAAGCTCTCAGTTTCAGATGTACACCCCTCCCGAGGCGGACTCCACGCGGGATGACCTGCAGTATTACGAGCACGAGGTGGACCCCAAGGACGACTGGATAGTCAAGACCAAGAAGGAATGGTCCGACCTCCTGCGGGTCCCCAGCAACCCCCTGGACCTGGCCGTCCTCCGCTTGACCAATCTGGAGCGAAACATCGAGCGGCGTTACCTGAAGGAGCCGCTGTGGAACCTGTCCGAGGTGGTGCGCCTGGCACCTCTCACCCCTCCTCCCGGCGGAGAGGAGGTCCCACTAGATGCTGTCAGCCTGGAAAGTGAGATCACGCCCAGGATGAGGACGTGGCGGCAGGCCCTGGACCGCTGTCGCAGTGCGTCTCAACTCTCTCTCTGCCTGCTGCAGCTGGAGAAAGCCATCGCCTGGGAAAGATCCGTCATCAAAGTGACGTGTCAGGTGTGTCGTAAGGGTGACGATGATGAGTACCTGCTCTTGTGTGACGGCTGTGATCGTGGCTGTCACATGTTCTGCCTGAGGCCCAAGGTCCTGCAGGTGCCAGAAGGCGACTGGTTCTGTCCCACCTGCGTCGCCACGGAAAACGGCGAATCTCCGAGATCACAGCGCTCATCGCGGAAGAGGTCAAAGGTGCAGAAAAGGCGTCTGGCAGAGGATAGCTCAGACGAGGATGATGGGTACAGACGAGGCATGACCACACGACAGAAAGACGCTGCAGCTTCCTCGAGTGGGACGAGCATCTCGCCCTCCAAACGCAGACGGATGGCCACACGAAACCAGCCTGACCTCACCTACTGCGAGATCATTCTGATGGAAATGGAGGCTCACTCCGACGCCTGGCCTTTCCTGGAGCCGGTCAATCCTCGCCTGGTGCCTGGCTACCGACGTATCATCAAAAACCCCATGGACTTCCTCACTATGAGGGAAAGACTTCTGCAGGGAGGGTACTGCAGCTGTGAGGAGTTTGCCGCCGACGCTCAGCTGGTCTTCAACAACTGCGAGCTCTTCAACGAGGACACGTCGGAGGTGGGCAAGGCCGGCCACGCCATGCGCCGCTTCTTCGAGAGCCGCTGGGTGGAGTTTTACGAGAACAAGGACAAATAGAGACGCTGCCCTCTGCTGCATGGGAGGGAGGAAAGCGCTCGAATGCCACGCCCCTCGTTACTACTAAAAACTCTGTCTGGAGAGCAGTCCTCCGGCCCTCTGTATGCATACACCTGTAGATATATGTATAGATTTGTTCCGTTGGTTTTACAAGTATCTGTTTGTCCTCCCCCCTCACCCGCCTTGATAAGGTTAAAGCATTTCTTTCATCACCTGGTGTTACGGCGTATAAACGTCTCCTCTTTATTCAGCTTCGTCCGAGTGGAAGTACTTCTTCAGGACTTGATCGGGTCACACTTGATGTCACGTGTCGCAGACACACCTCTATCAGGACCTCCTCACTCTCTCGACCGTTTTACGCGAAGCCTTCCGCTCCATAATGTATAGATCGCGGACCACCCGTGTCCCTTTGATCGAAAATGTAACGTGCTTTCGAGACTAGAAGCAATTTCctcagtatatttttattatatgctatatatacacttaaagacagaagaaaaaaaatagtcgGGATTATTTAATAGCAATAGACTGTAGTGAATCTGTACAGACCACGTCGTAGAGAGATGTATAGGTGACTCATGAAATGGCCAGTAAACATACTATATCACGTGTAACTCATCACGTCTTTCGCTTGTAGAGTATTGGTCTTACAAACCCGGAGGGTTGCCATCTTTAACTAGGGTATTCTTTTCTGCCACGACCCCAACctcccccccccccaaaaaccCAGAAATAAATCAGTGTTCATTCGTGAGGAAATCTGATGTAACGGCAGAAGCGACGCAGCGAAAGGCCGGTTTTAACCTACTTGTTTTTAAGCTCTGCTAGCTAGATAGCCGTTTTCAAAGCTTTTGCTCGGTGTATGACTATTgtctgtggggaaaaaaaaaagaaaaaaaaaaacctttaaaaacttTAGACTGTATTGATATTGGTTTATATGGAAAGGATATGTGCGTACTTATGGCAGTATAGTTTTGTTTAGCGACACTTATTTCTCACCGGAACAAGATCTTCGCTTGTCTCTTCAAGTATGATTGACCTGGTTTGCTCTCGGTTTTTCACGAACGCAGGTTTCTGAAACCGCCACATCCTCAGATGTTTAGactgttttatgtgttttaaagatatatatatatatgtgtgtgtgtgtgcgcgtttgaACCTGGACCAACTCCCTTAAAAAggactttttgtttgtttttcgtttttttacACTCGTCTTTTGACATTATCCCTGCTTTCTCAAATGAAAATGCCTTGCATCATTGCTGGTGTAACTGATGCATAAGAAACcccccgacacacacacacacacacacaatttttctTCGTGCACTGAGTAGAGGAGCGCAGTAGAGCACACTATTCATGTTCATTTGCATACACTGAAGTCGGTCTGCGCGGTAGGCAGCGCGTCTTTCACTCTGTGTTCCTCATCGTACAAAAAGGGACatgtctgcttctctttttttacagACGGTAAAACCTGAAGACAGTACTAGAAAACTCAACCAAATGTGGTGTCTAgtgaatttttaataatgtacagTTTTTGTGACTTTAAATTTGTTCCTTTCTATATTTTTAGGACCAATATATCGTTTTTAAGAGGCGACATTAAAATGACCATGTTGTTTCAAGGTAATGTAACACACGTGCATCTGTAGAATGTACTGTAAGCGGAAATAAAACCACATCTAGTAGACGAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU229355 lncRNA downstream 17998 4283769 ~ 4285557 (-) True G154895
XR_006247789.1 lncRNA downstream 101415 4200644 ~ 4202140 (-) True LOC122328378
TU229337 lncRNA downstream 101417 4200882 ~ 4202138 (-) False LOC122328378
TU229221 lncRNA downstream 238026 4063965 ~ 4065529 (-) True G154787
TU229223 lncRNA downstream 238675 4063523 ~ 4064880 (-) True G154789
TU229420 lncRNA upstream 219013 4546883 ~ 4550218 (-) True G154933
TU229643 lncRNA upstream 352113 4679983 ~ 4680279 (-) True G155085
TU229677 lncRNA upstream 379795 4707665 ~ 4710337 (-) True G155092
TU229678 lncRNA upstream 384819 4712689 ~ 4713082 (-) True G155093
TU229682 lncRNA upstream 399984 4727854 ~ 4731140 (-) True G155096
XM_043224266.1 mRNA downstream 4961 4292233 ~ 4298594 (-) True LOC122328525
XM_043225271.1 mRNA downstream 14086 4288270 ~ 4289469 (-) True mipb
XM_043224438.1 mRNA downstream 56417 4209314 ~ 4247138 (-) True bmp7b
XM_043225479.1 mRNA downstream 108559 4175746 ~ 4194996 (-) False LOC122329268
XM_043225423.1 mRNA upstream 2845 4330715 ~ 4337025 (-) True ptges3b
XM_043225131.1 mRNA upstream 12217 4340087 ~ 4342639 (-) False LOC122328988
XM_043225130.1 mRNA upstream 12605 4340475 ~ 4342639 (-) True LOC122328988
XM_043224118.1 mRNA upstream 189966 4517836 ~ 4521780 (-) True trim35-39
XM_043224117.1 mRNA upstream 194056 4521926 ~ 4530336 (-) True si:ch211-117c9.2
XR_006247892.1 other downstream 108557 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other downstream 108559 4173914 ~ 4194996 (-) False LOC122329268
XR_006247897.1 other downstream 397663 3894966 ~ 3905892 (-) False lad1
XR_006247838.1 other downstream 857591 3436779 ~ 3445964 (-) False LOC122328836
TU228728 other downstream 1351927 2942238 ~ 2951628 (-) False G154445
TU229703 other upstream 503948 4831818 ~ 4834520 (-) False LOC122329181
TU229887 other upstream 1126547 5454417 ~ 5455047 (-) True G155227
TU229892 other upstream 1150044 5477914 ~ 5479819 (-) False LOC122329286
TU230261 other upstream 2402981 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 2438738 6766608 ~ 6822978 (-) False rps21

Expression Profile