RNA id: XM_043224185.1


Basic Information

Item Value
RNA id XM_043224185.1
length 3190
RNA type mRNA
GC content 0.44
exon number 2
gene id npbwr2b
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7522064 ~ 7525501 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGACACCTAGATTAACAACTGCTTGTAACGTTAATTtctacaatactttttttttttaacaattcaaaacttTTAACAGTTTACTAATATTAACTTTTGTATATTACATATCAGGTTTGGTACtaatatgcacttttaaaagtggAATAAAAACGGGAATGTGGGAAGTTTTACCTCGCTTTCGCTCTCACGGTCTGTCAGTCAAAGCTCACAGGCTGTGACTCATCCATCATACAGTCTATTGCTTAACAATATGCCAATCACTCACCTCATCTGATGAGAGGATGAGCGAGCCAATCGCTGGATCTGATGCTAAGCAATAAGCCAATCATCCATCCTTATTATGACCGGTTGTGGTTTAAACGAACTGTCAGCCAATTGCTGGATCCCACACGTTCTAGTCTAATGTATAACACGCTGCTTTGAGCACTGGGTGAGAAAATGACTTATTAGCTTCTTTTAATTGAACTATTTTTGCATGATTAGAGTGCCGACACCTGGTGGGACAAATATTCTACCCAGTAATGACATaatgagaaaagaagagagagcaGACCCGAGGGGGAAACTTCCTGCCGTactgatttttagaaaaaaaatctaatcctgtttttcaaatatatattcgCATAGTCAAAAAGTGGCTAAAAAGTGTGAGAACATATTTCTGATCTTTACTTTGTGAAAAGCAAGCCTCTCTTTTTACACACAGAACACTGGACGCTTTAGAAATCATCAATCAGCTTATGGATAAAATACTATTGCATATCCATAAATGGGGTGGGGGTACCTTAAATGAAATCTCGATAGGtgattattttcatatattggAATATTCATTAGCTGTTTGAAATAGCTCGCCGTAGGACATGTCAACCCCCCCACACATAAGCAATCAACAAGAACGCGTGACTCTTCCAGAGATCGGCGAGAGGAGGCAGACGAGGAGAGCGCGCGGCGGAATGTGACGTCACCAGGCGCGCTTCTTTCCTGCTTGTTGGGAAAGCGCGAGCTGCGCTGCCTGGCGCAGAGAGTGGACAGCGCGCGCACGGAGAAAGAATATCCTTTTCGATCTCGTGATGCGCAAAGAGACAGATGAAAGACGTCGACCACCTTAGACTCGTGGAGAGATCTGCGAAAGCGAGAGCGCGGCTTTTTAAAGTAAAGCACTTATCCCCGGAGGCTCAGCTGTCATAGAATGGAGAACATCACGAGCCCCTTCATCCCAAACCCGACATGCAACTACAGCATGGACTATTACAACTCTCCAAACCGGAGCGATCTGAACTGCACCCCGCCGGCAGACTACTTCTTTTACGCGGACCTGTACGTGGTCCTCCCGGTCATTTACTCCGTGATATGCGCCGTAGGTCTGACGGGGAACACGGCGGTCATATACGTGATCCTCAAAGCCCCCAAAATGAAGACGGTGACCAACATGTTCATCCTGAACCTGGCGATCGCCGACGACCTCTTCACCTTAGTGCTGCCCATCAACATAGCGGAGCATCTGTTGCACTACTGGCCGTTCGGCGAGGTGCTGTGCAAAATCATTCTAAGCATCGACCACTACAACATCTTCTCGAGCATCTACTTTCTGACGGTTATGAGCGTGGACCGGTACCTGGTGGTGCTGTCGACCGTGCGCTCCAAGCGCATGCCGTACCGCACATACCGGGCGGCCAAGATAGTGAGCCTCTGCGTGTGGCTGCTGGTCATCCTCATCGTCGTGCCCTTCACCGTGTTCGCGGGAGTCTACATCAGTCCCGACGACACCGAGAGGAAAAGCTGCGTGCTGAGTTTCCCCAGTCCTGAAAGTTTGTGGTTCAAAGCCAGCCGGATTTACACCCTCATACTGGGCTTTGCCATTCCGGTGTCTACGATTTGCATCCTCTACACCATGATGCTGTACAAATTAAGAAACATGCGCTTGAACAGCAACGCCAAAGCGCTGGACAAAGCCAAGAAGAAGGTGACCATCATGGTGTTTATCGTACTGGCCGTGTGCCTGTTCTGCTGGACGCCCTTTCACCTCAGCACCATCGTGGCGCTGACCACAGACCTGCGGACCACGCCGCTTCTCATCGGCATCTCGTACTTCATCACCAGCCTGAGCTACGCCAACTCCTGTCTGAACCCGTTCCTCTACGCCTTCCTGGACGACAGCTTCAGAAAAGCCTTCAAGAAGATGCTAGAATGTAGACCCGCTTGAATGTAAGGGGTTAAAAGGCAGGTCGGACTGAATTCCAGCGGGATTCCAGGATTCGAACAGAACGCAAACGAGGCGTTTAGCAAATGGGATCTGAATgcaatttgaaaaatgtaatcgttttattaaataaaatgactgcaATAAGCCCGGGTTTTGAATTGGAGCAGCGAATTAACGATGCATTGTATggcaaagaaacattttaatatgcatttcatGAAAATAACTGGAATTATACAACTATAAATGTAAACTGTTGTCATTACAATTCTATATCCCgtattaaatcaaaatgcataaactctcagtcattttaaaaaggacCTATTTTCTCcaataaatgactgaaataagTCACCATCATAAATGATTATTGAGCGTCTCCAAATAGTAAGCAGctcatattattaaaataaatgtaattccaATTCAAATTCAATATCCTTTAGTTTGTTGCCAGTTAAGTTAATATTTTACGCCTGACGCAAATTAAGATACAGTTACGCTGAGCGTGTCCGCCATATCCATGCGCGCATTTCCAACAATAAAGGGAAACGTTTTCCTGAGCTAAACTCTAATGTAACAGTTTGTCTCCCTCTTGTGCTCTCTGTGATGAAATAACCAAGATGAAACACGTCTGACAGCAGAGCCCTGGAAACTTTAGTCAGGAATTACAAAACTACTTAGGATGACATCGTGTGTTTCTCAAGCAGCAGGGctttctgtgtatatatatttgtatagaCCTGCTTTTGTCACATGAAACGTCGTCACTTCCTGTCCGGCAGTATTTCATCTTAATAGCAAATTCGAGACAGctgtttaaatgtgcatttcctTTACTTTAAGTGAATAGCTATAAATGCGAAACATTTTCGTCTGTGTGTATCCAGAGATGTAAGTCGTGCAGATCAACACGGCGAAGCACACTGTCACATGGCTTTTTAATacatgttgtaaataaaatcgAATAAATCA

Function

GO: NA

KEGG:

id description
K08377 NPBWR2; neuropeptides B/W receptor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230451 lncRNA downstream 37859 7483923 ~ 7484205 (-) True G155629
TU230450 lncRNA downstream 39572 7482027 ~ 7482492 (-) True G155628
TU230449 lncRNA downstream 41494 7479495 ~ 7480570 (-) True G155627
TU230446 lncRNA downstream 60762 7460929 ~ 7461302 (-) True G155624
TU230445 lncRNA downstream 62284 7459531 ~ 7459780 (-) True G155623
TU230545 lncRNA upstream 240747 7766248 ~ 7817371 (-) True G155670
TU230540 lncRNA upstream 294245 7819746 ~ 7852251 (-) True G155669
TU230569 lncRNA upstream 309061 7834562 ~ 7836538 (-) True G155684
TU230570 lncRNA upstream 309061 7834562 ~ 7836538 (-) False G155684
TU230571 lncRNA upstream 309061 7834562 ~ 7836538 (-) False G155684
XM_043225082.1 mRNA downstream 179365 7310570 ~ 7342699 (-) False rgs19
XM_043225083.1 mRNA downstream 179459 7310570 ~ 7342605 (-) False rgs19
XM_043225085.1 mRNA downstream 179506 7310570 ~ 7342558 (-) False rgs19
XM_043225084.1 mRNA downstream 179533 7310570 ~ 7342531 (-) True rgs19
XM_043225086.1 mRNA downstream 180527 7310570 ~ 7341537 (-) False rgs19
XM_043224442.1 mRNA upstream 248800 7774301 ~ 7782717 (-) True kif3b
XM_043224007.1 mRNA upstream 258804 7784305 ~ 7788287 (-) True LOC122328356
XM_043224571.1 mRNA upstream 296621 7822122 ~ 7832584 (-) True LOC122328712
XM_043225053.1 mRNA upstream 328803 7854304 ~ 7861354 (-) True LOC122328943
XM_043225052.1 mRNA upstream 336702 7862203 ~ 7866387 (-) True LOC122328942
TU230401 other downstream 243741 7276448 ~ 7278323 (-) True G155596
TU230379 other downstream 518577 7000585 ~ 7003487 (-) False LOC122329304
TU230386 other downstream 525255 6994181 ~ 6996809 (-) False LOC122329304
TU230394 other downstream 540275 6966827 ~ 6981789 (-) False LOC122328436
TU230380 other downstream 654783 6864425 ~ 6867281 (-) False ccm2l
unassigned_transcript_2580 other upstream 660396 8185897 ~ 8185988 (-) True trnai-uau_5
unassigned_transcript_2581 other upstream 660694 8186195 ~ 8186288 (-) True trnai-uau_6
unassigned_transcript_2582 other upstream 661316 8186817 ~ 8186910 (-) True trnai-uau_7
unassigned_transcript_2583 other upstream 661616 8187117 ~ 8187210 (-) True trnai-uau_8
unassigned_transcript_2584 other upstream 663312 8188813 ~ 8188906 (-) True trnai-uau_9

Expression Profile