Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043224260.1 |
| length | 1302 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 7 |
| gene id | LOC122328520 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 12911070 ~ 12930813 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0007275 | multicellular organism development | biological_process |
| GO:0035102 | PRC1 complex | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232929 | lncRNA | downstream | 55218 | 12854297 ~ 12855852 (-) | True | G157298 |
| TU232926 | lncRNA | downstream | 57569 | 12853239 ~ 12853501 (-) | True | G157295 |
| TU232855 | lncRNA | downstream | 291013 | 12619019 ~ 12620057 (-) | True | G157255 |
| TU232817 | lncRNA | downstream | 377091 | 12533758 ~ 12533979 (-) | True | G157224 |
| TU232812 | lncRNA | downstream | 381577 | 12524479 ~ 12529493 (-) | False | G157222 |
| TU232998 | lncRNA | upstream | 99053 | 13029866 ~ 13040397 (-) | True | G157349 |
| TU233002 | lncRNA | upstream | 132841 | 13063654 ~ 13063904 (-) | True | G157353 |
| TU233007 | lncRNA | upstream | 172298 | 13103111 ~ 13103551 (-) | True | G157357 |
| TU233004 | lncRNA | upstream | 174948 | 13105761 ~ 13106920 (-) | True | G157355 |
| TU233005 | lncRNA | upstream | 175640 | 13106453 ~ 13107193 (-) | False | G157355 |
| XM_043225364.1 | mRNA | downstream | 100501 | 12771790 ~ 12810569 (-) | True | phc2a |
| XM_043225312.1 | mRNA | downstream | 186019 | 12674819 ~ 12725051 (-) | False | ephb2a |
| XM_043225311.1 | mRNA | downstream | 186019 | 12674819 ~ 12725051 (-) | True | ephb2a |
| XM_043225313.1 | mRNA | downstream | 237251 | 12665001 ~ 12673819 (-) | True | lrrc38a |
| XM_043223965.1 | mRNA | downstream | 249938 | 12622070 ~ 12661132 (-) | True | vps13d |
| XM_043224194.1 | mRNA | upstream | 5508 | 12936321 ~ 12940885 (-) | False | LOC122328487 |
| XM_043224195.1 | mRNA | upstream | 5508 | 12936321 ~ 12940885 (-) | True | LOC122328487 |
| XM_043225087.1 | mRNA | upstream | 136514 | 13067327 ~ 13080224 (-) | True | spsb1 |
| XM_043225300.1 | mRNA | upstream | 192635 | 13123448 ~ 13128638 (-) | False | ca6 |
| XM_043225299.1 | mRNA | upstream | 192635 | 13123448 ~ 13128638 (-) | True | ca6 |
| TU232479 | other | downstream | 986420 | 11922844 ~ 11924650 (-) | True | G156985 |
| XR_006247884.1 | other | downstream | 1109438 | 11799922 ~ 11801632 (-) | False | si:dkey-93l1.9 |
| TU232418 | other | downstream | 1164450 | 11744119 ~ 11746620 (-) | False | LOC122328546 |
| XR_006247899.1 | other | downstream | 1165675 | 11745262 ~ 11745395 (-) | True | LOC122329329 |
| XR_006247903.1 | other | downstream | 1168267 | 11742670 ~ 11742803 (-) | True | LOC122329333 |
| TU233029 | other | upstream | 210265 | 13141078 ~ 13217408 (-) | True | G157367 |
| TU233040 | other | upstream | 349443 | 13280256 ~ 13282327 (-) | True | G157373 |
| TU233846 | other | upstream | 1396153 | 14326966 ~ 14330784 (-) | True | G157909 |
| TU233895 | other | upstream | 1650281 | 14581094 ~ 14589593 (-) | True | fitm2 |
| XR_006247853.1 | other | upstream | 2416604 | 15347417 ~ 15474377 (-) | False | magi3a |
