RNA id: XM_043224283.1


Basic Information

Item Value
RNA id XM_043224283.1
length 2452
RNA type mRNA
GC content 0.47
exon number 10
gene id asb14b
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11651399 ~ 11656603 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAAGCGACCAAAAACACGGCACTGATACAACTGCCACGACTGTTTTCAATATTCCCCGTTGCCTCAGagtttattattgaaatatggAGGAAGTGTATGAGGCTGCGGAAGATGACTggaatgatgatgatgatgatgatgaggccACTCAGTACATGATTGAACAGAGTCTATTGGAGTACAGTAAACATGCTGATTCAGCTACCAGTAATCCATTAGACTGCATCGACCATGAGGAAATTTTCACTGCTATACAAGCTGGTAATGAGGATGCTCTGAAGGTCCTGGTGCAGCGGAAGGAGGCTTTGGCTAATGCAGACTCCAAGGGCTGGATTCCTTTGCATGAGGCAGCAGTGCAACACAAGAGGAGCATTCTGGAGATCACTTATGCAGCATCTCCTCAGGGGTCAGGGCAATGCCGTACTCTGAGAGGGGAGACTCCGCTGTTTCTCGCCGTTGTCCACGGTCTCCGAGAGAATGCCACATTCCTGCTGCAGAACGGTTGTGACCCTGACTGTAAAAATGAGGCTGATGATTCTGCATTGGTTGCAGCCATAAAGAATGACCAGTATGACCTGGCTCTGCTGCTGCTACGCTACAATGCCACAGTGGACCAAAAAGGAAGTCTTCAAAGAACCGCTCTGCATGAAGCATCCGTGCTCGGCTTGGATAACTTTGTATACCTCCTCCTACAATCTGGCGCCGACCCAAATGTCGTTGACGTCTGTGAACATACTCCTTTAGGACTCGCAGCTCAAGCCGGACATTTTAACGTTGTAGAGATTCTGCTTCAGAAAGGGGCCAGTGTGTGGTCCAAGCCACAATCTCTCGGTTCAGCCTCAGTTTTATTTGATGCTGCGGCTTCTGGAAACCCCGATATCATTTCACTGCTGCTGGAGTATGGAGCCGACCCCAACGTTCCCACCCACACCGGCCATCTCCCCATCCACCGCGCAGCCTACCGCGGACATCTGCTAGTCCTGGAGCAGCTGATCCCTGCGACTAAGAAAGAGGCGATCAAAGACAGCGGCATGAGCCCGTTACACTCCTCCGCTGCAGGAGGTCACTCTCAGTGTCTGGATCTGCTCCTGAGCTCCGGGTTTGACGCAAACTTCATGCTGCACCCCAGAGTGCGCAGGAACTATGAAGACGAGCGCAGGTCAGCGCTGTTCTTCGCCGTATCCAACAACGACGTCCAGTCAGCGAGGCTGCTTCTGGAGGCCGGGGCCATGGCCAATCAAGACCCTGTCAGCTGCCTGCAGGTGGCCATGCGATTGGGCAACTACGAGCTGATCAACACTCTTCTCCGCTACGGTGCCAATGTGAACTACTACTCCCGTGTCAACACCACCCACTTCCCTTCCGCCCTTCAGTACGCTCTTAAGGACGAGGTGATGCTGCGTATGCTGCTCAATAACGGCTACGATGTGCAGCGCTGCTTTGACTGCCCGTATGGACAGGCCTCGCATGTGCCCGTGGATTATGAGGGCTGGAGCGTTTCTGTCATCAAAGATGTTGTGTTCTGTGAGGTGATCACTGTGTACTGGCTCAAGCACCTCTCAGCCCAAGTAGTGAGGATCATGCTGGATTACGTTGATCATGTGACCCTCTGCTCCAAACTGAAGAGCATACTAGTCGGACAAAAACAGTGGCCAGAAATATGTAAGATACAAGAAAACGCTCGAAGCCTGAAGCATCTCTGCAGACTGAGGATCCGCGACTCTTTGGGTCGCTTGCGCCTGAGGGCTCCAGTTTTTATCAGTTTCCTGCCTCTGCCTGCCAGTCTCAAAGACTATATCCGCTTCAAAGAGTACGACATTTACAGCAGAGGAAGTATGACAGAATAAAAGCAGATTGATAAACATGCACAAGAGAAGCTGCTATAACAATCTTtagaaatgtttactttttattaaaaagccttgtgaaatataaatttgtgtTATGAAGACACACAGTGCTGAACATCTGTGATTCAATGGCTCCCAGTGACTGTTTGGTTACACGCATTCAccaaacataacttttttttctgcacgTTCAAGAGAAGAAAGGAACTCGTTCAGGTTTTGAACAGCTTGGGGGTGACTAATTGATGACACGTTTTTCCTTTTgcgtgaactatccctttaaatgtgatttaggATTCTGGCCAGTTACAAAACTATTTGTGCAAAGGGCCAGGTTTTCTTCTACTGAAGATTTTTTAAGATGTTCTTTGTATCATTTCAAATCAGAGCTTGACTGCCGCTGCCATTAAAGCTAAAGGGGatcaattaaattaactttCCTCTTAAATTACTATGGTGATAAttgatactttttaaaaaaaagcagaagcaaaaaaaatatcaaaatagatGCGTTATCGCTAGAATACCCCTAATGTGCGTGAATTGTGAGAATGTGTGATCTGAATGACGCTTGTTAGAATTAAATGAACGTTAATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232213 lncRNA downstream 111354 11539623 ~ 11540045 (-) True G156812
XR_006247856.1 lncRNA downstream 274711 11376177 ~ 11376688 (-) True LOC122328925
TU232181 lncRNA downstream 297571 11353159 ~ 11353828 (-) True G156785
TU232149 lncRNA downstream 406579 11242600 ~ 11244820 (-) True G156762
TU232146 lncRNA downstream 488380 11162664 ~ 11163019 (-) True G156759
TU232436 lncRNA upstream 105837 11762440 ~ 11763023 (-) True G156962
TU232440 lncRNA upstream 107106 11763709 ~ 11850582 (-) False atp2b3b
TU232453 lncRNA upstream 124964 11781567 ~ 11782366 (-) True G156971
TU232457 lncRNA upstream 137000 11793603 ~ 11851710 (-) True G156972
TU232469 lncRNA upstream 398643 12055246 ~ 12061368 (-) True G156978
XM_043224282.1 mRNA downstream 128 11638613 ~ 11651271 (-) False tasorb
XM_043224280.1 mRNA downstream 128 11638613 ~ 11651271 (-) True tasorb
XM_043224281.1 mRNA downstream 128 11638613 ~ 11651271 (-) False tasorb
XM_043225461.1 mRNA downstream 20423 11544530 ~ 11630976 (-) False LOC122329255
XM_043225460.1 mRNA downstream 20446 11544530 ~ 11630953 (-) True LOC122329255
XM_043224286.1 mRNA upstream 888 11657491 ~ 11683407 (-) True dnah12
XM_043224292.1 mRNA upstream 75628 11732231 ~ 11734946 (-) True ognb
XM_043224297.1 mRNA upstream 80294 11736897 ~ 11737585 (-) True LOC122328548
XM_043224295.1 mRNA upstream 88117 11744720 ~ 11746587 (-) False LOC122328546
XM_043225317.1 mRNA upstream 143328 11799931 ~ 11801632 (-) True si:dkey-93l1.9
unassigned_transcript_2621 other downstream 133318 11518010 ~ 11518081 (-) True trnah-gug_32
TU232124 other downstream 546176 11100744 ~ 11105223 (-) True G156746
TU231697 other downstream 973350 10675684 ~ 10678049 (-) False LOC122328798
TU231532 other downstream 1284030 10365543 ~ 10367369 (-) False LOC122328779
TU231517 other downstream 1412126 10237096 ~ 10239273 (-) False ankrd52a
TU232410 other upstream 84797 11741400 ~ 11746620 (-) False LOC122328546
TU232414 other upstream 84797 11741400 ~ 11746620 (-) True LOC122328546
XR_006247903.1 other upstream 86067 11742670 ~ 11742803 (-) True LOC122329333
TU232418 other upstream 87516 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other upstream 88659 11745262 ~ 11745395 (-) True LOC122329329

Expression Profile