RNA id: XM_043224289.1


Basic Information

Item Value
RNA id XM_043224289.1
length 7657
RNA type mRNA
GC content 0.45
exon number 43
gene id flnb
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11705759 ~ 11722286 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGCGCTGTACGATTATAATTATGGGCCAGAATTGGGGGCTGTAGGGCACTCCCACCACCAGCGAAGCTACATGAAAGCTTCGTGCTTCACGGCAGTTCTCAGTACGGTATAAAAGGTTTTGAACTGCACACTGATCAAAGAGAACGATGGGCGACTTTAAAAATAGTGTTACAGCTGCTGCGATCAACCTGGCAGATGATGCACCTTGGAAAAAGATACAGAAGAACACCTTCACGCGCTGGTGCAACGAACATCTGAAGTCTGTGGAGATGCAGATCAGCGATCTCAAGTTCGATCTGAGCGATGGCCTCATCCTTATCTCGCTGCTGGAGGTCCTGAGCCGTAAGAGGATGTTTAGAAAGTACCACACCCGACCCACCTTTAGACAGCTGAAGCTAGACAATGTTTCGGTGGCTCTGGAGTTTTTGGATCATGAAAAAGTTAAGTTGGTGTCCATAGACAGTAAGGCCATAGTGGACGGGAATTTGAAGCTGATCCTAGGTCTAGTGTGGACCCTGATACAGCATTACTCCATCTCCACCCCGGTGTGGGAGGATGAGGCAAACGATTCTGTCTCCAAACTGACTCCAGAGATGAGGCTTCTGGGATGGATCCAAAACAAAGTCCCTGAGCTCCCCATCACTAACTTCAGCCAGGACTGGCAGGATGGCAAAGCCCTTGGTGCGTTAGTGGATGGACTGGCACCAGGCTTGTGTCCTGACTGGGAGAGCTGGGACACGGTACATCGGGTGAGTAACACTAAAGAAGCCATGCAGCAAGCAGATGATTGGCTTGGAATTCCCCAGGTCATAGCCCCAGAGGAGATTCTTGATCCAGCTGTGGATGAGCAGTCAGTGATGACATACCTCTCACTTTTCCCCAAAGCCAGACTGAAACCTGGAGCTCCACTCAAGCCAAAAAAAGtgcctAAACCCAAAGCCTGTCGTGCCACAGGACGGGGATTGCAGTCCAAAGGCATGAGAGTAGGTCAGCTGGCCCAGTTTAAGGTTGACACCCACAAAGCTGGGCCTGGAAATCTGGAGGTCGATATTAGAGACCCCAGTGGTAAGAAAGTGGCTGTTACACAGAAGGATGCACATGAAGACGTATATACCTTTGAATATACACCCACTGCTACAGGAGATCACGCAGTGGACATCACTTGGGTTGGTCAGCACATTGCCAAGAGCCCATTTAAAGTCCATGTTGGTTCAAAAGCTGGCCCGCAGAAGATCCGGGCATGGGGACCAGGACTGGAGGGAGGGACTGTGGGTTTGTCTGCTGATTTCTTAGTGGAATCTGTTGGTGCAGATTCTGGCATGCTGGGTTTTGCCATTGAAGGTCCGTCTCAGGCAAAGATTGAGTGTGATGACCATAATGATGGCTCCTGCCTAGTGCGGTTCTGGCCAACTGAGGCCGGTGAGTATGCTGTACACGTAATGTGTGATAATGAAGAAATCGAGGACAGTCCCTTCATGACCTCCATCAGACCGAAGAGAAAAGATTTCCGCCCTGACAAGGTGAAAACAGAAGGACCCGGTGTTTCCCAAACTGGCTGTATAGTGAACCTTCAAACAGAATTCACTGTAGATACCAGGCAAGCTGGTGAAGGAGAGCTTAAAGTTTATGCTCagAGAGCAGATGGAGAGTTTGTAGATGTTATTGTTGCTTCTGAACAATCTGGTGTCTTTGTCTGCTCCTACATCCCTTCATCTCTCTCCAAACACACCATTGCCGTGGCTTGGGGAGGAGTCATGGTTCCTGGCAGTCCTTTTATTGTGACACCTCGCAGGATTAAGATTACACCATGTAGCCCAGTCTGGTTTAAACCAGATGGATGGGAAATGTATTACTCTGATGACGAGATGGACCTCGATGAAGACTTTTCAGAGAATTCACGGCCTGGTGGCCATGGAGAACTTCTTATGAACATAGTCAGTCCATCAAATATCCAAGCCGATGCCACAAAGGTAAGGGCTCATGGTCCAGGCCTAAAAGAAGGTTTTCTTGGAGAACAGGCTGAGTTTATAATTGACACAAGGAGAGCCGGCAGTGGAAGACTTGCCATAAGAGTGGATGGACCCTGTGAAGTTCCACTACAATGTCTGGACAATCAAGACGGCACTTGTACAGTGTTTTACCTCCCCACAGAGCATGggatgcacaaaataaatgtccTTTTTGACAACTCTCACATAACTGGCTCTCCTTTCCAGGCTGTTGTACAGAAGCCGACTGACCCCTCTCAGGTTTTGGTAACAGACCCTGATCTGCTACAGGGTAAAGTCGGTGAACCTTGCATTGTAAATATAGACTGTGCAATAGCAGGATCTGGAGCTCCATCTGTGCAGGCTATCTCAGACTCAGGAGTCATTGTCCAAACCGAAGTGAAGGAGAATGAAGATGGCACCTACACAGCTGTTTATGTGCCTCTAACTAGTGGCGTATATACGTTGCTTCTGAAATACGGAGGAAAGGAGGTGCCCTTTCGTAAAGTTATGGTGAATCCAAAGCTCTACAAAAGCCATGTAAAAGTGAGCAGACAAGGGGTTGTAGTTTGTGATTGGGAAGCTGACTCATGTCAAGTTGTTGCAAATGGTTTGGGTCTCCAAAAGGGCCTCACTGGACATCCTAATGTGTTTCATGTAAACGCCAGCAAGTCTTCAGTTAATGATCTGGACATAACAGTGGAAGGTCCGTCTGAGTGTCAGGTGACATGTAAAGACAGCGGTGAAGGCATGTATAATGTGGAGTATACTCCTTCAGTGCCTGGTGACTATAAGATCACCATTACCTGCGGAGAGAACCACATTCAAGGAAGTCCATTTATTGCATCAGTGATGGATGTTTCAAGTACTGCAGACTCTGGAGTCTGTCTTCAGTCAGGGGTTTGCTTATCTACAAACACTCACGATAATGAAATGCCAGGGATCAAATACAGTGGAGATGGGATTTACAGAACAAGTTCACCTTCATCACTGGAAGACAGAGATTCCTTCATAGGTCCTCAAGGACTTTGTGAAAGCAGCAGTCCCATCCAGTTCCAAGCATTGCCTAATTTTGACCGTGAAACAGAGCTTCCTGCAGCTCATGGTGGGAATATGGCAGAGATTATTGTTCCTGGTATTAAAGGTGGAGTCTGTGGTAGAACCCCCCAAAGGTTTACGATTGACTGCAGCAGCACTGGAGAAACACCAGAGACTGTTGCTGTTGTGAGACCTGATGGTACCATGGAGCTTCTGGAGCTGACAAACAGTGGAGATGGCAGTTATACTTTTGTCTATTTGCCCACCATGGATGGCTGTCATTTATTAATGGTGAAATTCACTAATGAGGAGAGTTTTAATCGacatttcAAGTTTGAAGTGTTGCCAATAGATGACAGTTCTCAAGTTGATGTATCAGGTCCAGGTCTGACATCAGGGATGTGTTCCTGGCATCCTCAGACATTCACTGTCGACTGCACCTACACAAGAAAAGTTCCACAGCTTGTTACCGTAATGACACCAGATGGCTTGACTGAGACAATAGAGGTTGAAGACAATGGCGATTGGACATACACAGTGAACTACGCCCCTTCCATGGAGGGGCTTCATTCTTTGATGGTCAAATATGCTGAAGATGATTCATTTTGCAGtcctTTAAATTTTTACGTGTTGCCTGTGCCTAATGCTGATGATAAACACTGTGGAGATAAAAGCTCAAGTAATGGTTCTCCGGATTTTGGATTGGGCTTAGAGAAGGAAGTGTGTGTAAACACTCCTCAGACCTTCACAATCAATGGCAGCAGCACTGGAGAGCCGCCAGAGACTGTAGCTGTTGTTACACCTGATGGAAAAATTAAGCTATTAAATGCAGAAGACAACGGAGATGGAACATACTTGGTGTCGTACTCCTCTTCTTCTGAAGGATCTCACTCAATTATGGTCAAATATACCAGTGACGATTCCTTTAGAAGTCTTCTTAGGTTTCACGCAGTACCTTCTCACTCTGGTAGCAGTGATGAAGATGTCTCAAATGAAGAGGAACTTTTGAGTCAGGAGGGAAGTGTCCATGCTAAGGCTCCTCAGATATTTGCTAATGGCTGCAGGGTGGCACCAGAGAATGTCACCATAATGAAAGATAATGCACAGAACTGTTCAACCGAACTTGCAGATGTGATGGACAACAAAGACCAAACTCGTGCACCAAATATGGAAGGCTGTAATTCCGTAATGGATAAATACAGTAATGAAGAGACTATAAGAAGCATCTCTGAGTTCCCAGAAGACTTAACAGAGCCAAAGATTTGTGCTCAAATCCCTCAGTCGttcaaaatcaacagcagtaaATCCGGGAAGCCCCCTGAGTGTGTACTGATGATCACCCCCAATGGAGAGGCTGAACTGACAGAGGTTGAAGAAAACGCAGATGGGACTTATGCGGTTAAATATTCTCCAACTACAGAAGGACTTCATTCCTTGGTGGTCAAATATGCTGATGATGAGTCATACTGCAATCCTCTGAGATTTCATGTCCTGCCTCACTCGTCTATGAAGGATCAACATGTAACCAGTGCAACTGAGGTTTGTGGTGGACAGTTAAAGGAAGATGTCTGTGCTCAAGTTCCTCAGACTTTTACAACTTGCTGCAGCGCTAGTGAGGCTCTGGACACTGACCTTATGAAAGCTGATGGCAGTACAAATCCTGAAATGTTAAGTAACGAGATCAAGATCGGTGCTGTAAAACACCCACCCACCGCTGAAGGCTCTCGCTCCTCAGCTATCAGAAATGCCAGCGAGGAAGATTTTCAAAGTCACCCGCCGTCATCCACATGCAAATCTCAAGGTTTTCAAAACAAGGTTGAGAGCAGAAATGTAATTCCTCTCGGTGCCATTAATCAAGTAGGGTTTCTATCATGTGATATAGTCCTGCCATCAGACTTAAGTGAAGGTGAAATTACAGGTGAGGTGATCACGCCGTCTGGAAAGACAGCACAGCCCAACATGATTGAAAATGAAGACGGTACCATCATTCTAAagtatgatccttcagaagagGGTCTTCACCAGCTACTTATTAAATCATCCAGAAATGATCTAGCAGAACTTCCACTGGAGTATTATGCAAATAGTCTTGCTAATCGCAGCACTATGGCCTATGGACGTGGCCTTGTGTATGGAATTGCAAATGAGATGGCAACATTCACCATCTGTCAGGAAGATTCAGCCTCGAGTGAACTGGACATCACAATTGAGGGTCCATCTGAGGCAGATGTGCGCTGCTTGGACAATGAAGATGGCACTTGTACTGTGAGCTACTTCCCAACTGAGCCTGGAGATTATGAAATCCAGATTCAACATGATGACGTATCTATCCGAGGTAGTCCCTTCAAAGCCAGAATTGCTGACGGAAATGTGAGAAGGTCACAGGTAAAACTGGGCAGTGCGGTTGACTTTAGCTTGGACATCACCGAAGAAGATATAAGCCAGCTCTCTGCCAGCATCATGTCACCCGCAGGCAATAATGTACCCTGCTTGCTGAAAACGCAACCTGACAGCCACCTCGGTGTATCATTTATCCCCAGAGAGGCCGGTGAGCATCTGGTCAGCATCATGAAGGACAATGAGCATGTGAGCAATAGTCCCATCTCTCTTTCCATCAGTCAGGCAGAGATAGGAGATACCAGCAAGGTGAAGGCCTTCGGCCCCGGCTTACATAAAGGGCGCACCTTCTGCACATCTGAGTTTGTGGTTGACACTTGGGATGCAGGATATGGTGGGCTAACAGTTGTAATCGAGGGTCCCTGTAAAGTAGACGTTCACAGTGAGGAACTGGAACATGGAACCTGCAATATATCGTACTGCCCAATCAAGGCTGGGAATTACAAAATCTCCATTAAATTCTCAGATGAACACATTCCAGGGAGTCCTTTTACAGCAGTGGTGACAGACCAGGGGCTTATGAGAGAGAACGTCACGTACAACCAGAAAGCAGCTTCTATTGCCAGCATTGGGAGTGAATGCAGCTTAGCCTTCAAAATCTCAGGTTCTGATGCTGAGACACTGTCTGCTTATGTGCATGAGCCCTCAGGTCGTCCAGGAGAGGCTGTTATTATTGCTACAGGCAGTGACACCTATGCAGTGAGCTTTCTAGCCAAAGAGACTGGAGTTTATAATGTGACCGTAAATGACCAAGATCAGACAATCCCTGGTTGGCCACTGCAGTACACTGTCGGCCCACTTGGACAGGGAGGATGTGAAAAGGTCCAAGTGTGGGGGCAAGGACTTCAAAAAGCTCTAGCAAGTGTTCCAGCTGACTTTAATATTTGGTCCCGTGAGGCCGGAGCGGGAACTCTGTCTGTCTCAGTAGAGGGTCCTGGAAAGATTGAGCTGCACTTTGATGATCAGCTGGATGGTTCTTGCGTTGTGTCCTACACGGCTCAAGAGCCTGGTGACTATGAGCTTTCGGTCATGTTTGATGAGGAGCATGTTTCTCAAAGCCCTTTCTATGTATCTGTCAGTGCCGCCACAGATGAGAATCTCACACAAGGACAAAACTGCTCTGATCATATTCAGATGTGTAACAGCCACGAGGAACCCTCTCTGTCAGACACGGAGATAAACACAACATCTGACAGCAGTGCTGAGCCAGTTTTCCTGTCTGACGCTAGTAAAGTCATCTGCCATGGCCCAGGCCTGAGTAAGGGCTTTCTAGGAcgcaaaaacactttttatgtgGACTGCAGTAATGCTGGACGAAACTTTCTCTTTGTCGGCATGCATGGCCCCACCGTCCCCTGCGAGCGGGTGTCAATCATTCACATGGGCGGACATCACTACAGGATCAACTATGCTGTGAAAGAAAGGGGAAAATACATATTAGCAGTGAAGTGGGGAGATGAACACATTCCAGGGTCTCCATTCCATATTACTGTCCTGTGAAATAccatcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatactctactgttaaaagtttgaggttggtagggctttgtttttgaaagaagtctcttatgctcacgaggacgcatttcattaaaatgcagcaaaaatagCATAGCAATATTGATTAATggattaattaatacattttaaaataacttttcatacatttttaaaaagtaatttattactttgatgcaaagctgaattttcagtatcattactctattcttcagtatcacatgatcctttcagaaatcatactaatatcctgatttgctgctcgagaaatatatattttttattttcattggtaCTATAAACAGCTGGTGCTTCATGTTTTTGTGCAGTTCTCTGGATTCTTTGTTAAATAGAAAGAAAagcattcattcatattttagtttacaagTTGATGTTCAATGTTAGTAATTTCTTTAAACatctcttgttgttgttgttgttgttgttgttgttgttgttgttttttctatgttataattttaaaatatattctcatATTCTCCAAACAAATTTAGCTTTTACTATATTTCATCCAAACTAAATTAGATGACTGACGTTGAGATTAAAATGAGGAATTTCAACCAAACAAATGTGATTTGCTTCCATAACTTTGCTCATAAATGTgcaatgaatataaatgcaacaaaatggcTTTAAATTTCAAATGGACTGAATCTGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232067 lncRNA upstream 49379 11655795 ~ 11656380 (+) True G156701
TU232066 lncRNA upstream 50443 11654916 ~ 11655316 (+) True G156700
TU232065 lncRNA upstream 51142 11654255 ~ 11654617 (+) True G156699
TU232064 lncRNA upstream 51599 11653380 ~ 11654160 (+) True G156698
TU232052 lncRNA upstream 54652 11614130 ~ 11651107 (+) True G156690
TU232234 lncRNA downstream 5002 11727288 ~ 11745343 (+) False kctd6b
TU232248 lncRNA downstream 8712 11730998 ~ 11732361 (+) True LOC122328549
TU232250 lncRNA downstream 11970 11734256 ~ 11734937 (+) True G156828
TU232225 lncRNA downstream 19822 11742108 ~ 11745778 (+) False kctd6b
TU232229 lncRNA downstream 19822 11742108 ~ 11745343 (+) False kctd6b
XM_043225498.1 mRNA upstream 1369 11695816 ~ 11704390 (+) True slmapb
XM_043225499.1 mRNA upstream 1369 11695816 ~ 11704390 (+) False slmapb
XM_043224116.1 mRNA upstream 12268 11685712 ~ 11693491 (+) True atp6ap1lb
XM_043224284.1 mRNA upstream 67736 11634276 ~ 11638023 (+) True LOC122328536
XM_043224285.1 mRNA upstream 67736 11634276 ~ 11638023 (+) False LOC122328536
XM_043224291.1 mRNA downstream 870 11723156 ~ 11726492 (+) True abhd6b
XM_043224294.1 mRNA downstream 4959 11727245 ~ 11730179 (+) False kctd6b
XM_043224293.1 mRNA downstream 4962 11727248 ~ 11730179 (+) True kctd6b
XM_043224298.1 mRNA downstream 8694 11730980 ~ 11732003 (+) False LOC122328549
XM_043224290.1 mRNA downstream 16509 11738795 ~ 11741871 (+) True dnase1l1
unassigned_transcript_2622 other upstream 187223 11518465 ~ 11518536 (+) True trnae-uuc_33
unassigned_transcript_2620 other upstream 189888 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2619 other upstream 191913 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2618 other upstream 193061 11512625 ~ 11512698 (+) True trnan-guu_35
TU231904 other upstream 528726 11174421 ~ 11177033 (+) True G156586
XR_006247901.1 other downstream 2332078 14054364 ~ 14054500 (+) True LOC122329331
XR_006247900.1 other downstream 2334399 14056685 ~ 14056821 (+) True LOC122329330
XR_006247782.1 other downstream 2577415 14299701 ~ 14343274 (+) False si:dkey-151g10.3
TU233368 other downstream 2961704 14683990 ~ 14685316 (+) False LOC122328906
TU233419 other downstream 2989861 14712147 ~ 14714533 (+) True LOC122328914

Expression Profile