RNA id: XM_043224506.1


Basic Information

Item Value
RNA id XM_043224506.1
length 3212
RNA type mRNA
GC content 0.44
exon number 6
gene id slc2a12
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9908788 ~ 9917655 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACAGCGCCTTCCAAAACAaggaacgtgtgtgtgtgtgtgtgtgtgtgtcgacaCAAGGACAGATAAGTTACTGCCACCGGGAGGAGAGAGTCGAGGAGCTGAAATGATTTCGTAGACAGCCTTCCACGTTATTGACGTTAAAAAGTTGTACCACAACCCTTGAAGAGCATGGACGCATCTGAGGAGCCCATAAGAATGACTTCTGATCCTCAGAGCAAAACGTGTCTACAAAATCAGGAGACACACAAATATCAAGTGAAAAGCCCATCTGCAAAATCAGgCAATGGTGCAGCGCTGGTGTTGTGCTCTGTGTCTGTGGCGTGCCTGAGTGGGTTGATGATGGGCTACGAGATGAGTCTGATATCAGGAGCATTACTTCAACTCAGGGATGTTTTGACTCTCTCCTGCCCGCAGCAAGAGCAAGTTGTTGGCTCTCTTCTGTTTGGAGCCTTCCTCCTCTCCCTGGGTGGTGGCACCATCCTGGACCGCTACGGACGGCGGTTCTCCATCATCCTCACGGCGCTGCTATGTGTCTTGGGCACActtctaagtgtgtgtgtggtgtcatTTTGGACGCTAGTAGTCGGGCGGATGCTTGTCGGCATGGCAGTAGCGCTGTCAGGCACGGCGTCCTGTCTTTACGCGGCAGAAGTGGCACCGGCCGCCTGGCGCGGgaggtgcgtgtgtgtatatgagttGATGGTAGTTTTAGGGATGCTGTTGGGTTTTGGACTGAGCTGGGCGTTCGCAGGGGTCCCGGATGGATGGAGGTTTACGTTTGGTGGCGTGCTGCTCCCTGCTTTGCTGCAAGCCGGCATCATGCCACTTTTGCCGCAGAGTCCTCGCTTTTTGCTGGCCCAGCAGCGCGAGAAAGAGGCTCACGCAACTCTCCTCCGTCTTCGTGTTGGCATCAAAGGAGTAGACACGGTGGAGAATGAACTTGGCTCCATACGCATGGCATTGGGGGCGGAGCGCCTGCACGGCTTCCTGGACCTCTTCCGCTCTCGTGACAATATGCTTCAAAGACTGCTCGTTGGTGCAGCGCTGGTTTTCTTGCAGCAGGCTACGGGACAGCCCAACATTTTAGCGTATGCGTCGACTGTTCTCAGCAGTGTGGGCTTCCATGGGAATGAGGCGGCGACTCTTGCATCTACAGGGTTTGGTGTGGTTAAAGTGGGCGGGACCATTCCTGCAGTCTTTCTAGTGGACAAAGTGGGGCCTAAAGCCTTATTATGTGTTGGCGCAGTTGTTATGACATTGTCAACAGCAACTCTGGGGGCCGTTACTATGCAGAGCCGCACACATGTTTCTAGCCTATGCAGAGGTCCTGTTAATAAAGCAAACCTCACAGTTTTTGGGACGGGAGAAGAGACTGATTTCCAGACAAACACTCCACTGGGATTGTACCATCCTTCTAACCATGAACCTCAAGACAAGCACAAAACAAATGCTTTCCTCACAAGCATTAATGACACTAAGGACCACTGGATTTTAAGTCACACTCCAGATCATAGGACAGCATTGATGGAACTGGCTGAGGGTTCTGAGAAAGACGGTTCCAAAATTGCACTTCAGTCTCTTCATGTTAATGAAGTGTCACCCTCACTGAAATGGATCTCTCTCGTCAGCTTGCTGGTATATGTAGCTGGATTTTCCATCAGTTTGGGACCAATGGTTCATGTGGTTTTGAGTGCGATCTTTCCAACTGGCATCCGTGGAAAGGCCGTGTCCGTCATCTCTGCCTTTAACTGGGCTACAAATTTGCTTATATCGATGACCTTCCTTACTCTGACAGAGAGGATCGGTCTGCCCTCGGTGATCTTCTCCTACGCTGCTATGAGCTTCATGTTGGTGGTGTTTGTGATTGTATTTGTGCCAGAGACGAAAGGCCGATCACTGGAACAGATCTCTAAGGAGCTTGCCATGAAAAATCACCTGAGCAGTAGACTACTATGTCATAGAAGAAAACACGAGGCTACAGCACAACCCTTACAGGAGGAAAAATCCCTCGCTATTTGACTTTTTAACTAGATAAAGAGTGGAAGAGCACTAGGGTATTGCAGACAACCGATTGTTCTTGGTGCCATTACAGGACAGACAAACCCGTGACTGCATTTTTCAAAGTATTGAAGATATATAACTGATTGATGCTGCCACGGATATAATTTAGCTTGATAAACCTTCCAATGGCATGATGGGTCAGTTGAGATATGTTTATATGtcaaattgatttatttgtgttctttgtaaaaatgcattttaagtagTTTTGGTACTGACTGAGATTTTATATGGAGAATTTACAGCTAACTGTTATGAAACGCTTTGAAAATTGTGCAATCATGACCATAATCCTGCCATGACAAGTCAAAGCCAAGTTCGGTGGCCCAGTCACATATCAGTGTTTGCGTGCTGAGCACTACTTATGAGGTGAAGGTGTCTCTCCGGCAGGAGATGCCTTCATGTAAGCAAACAACATTATGTAACATTACGAACTGAAATGTTATGTAATACAAACTGAAAACGTTTTGACTTAAAACagcctttttgcatttttttgactaaaagcacatttgataaatataaaacaaaaataaattaagacaaaaagtAAAGATTGTAGCGATCTGTTTTCTATagattgctctttttttcagtttctcagggaattatgcaaatgtaatgACTTCCCTGAGGTAAGTGTGATATCACGTGACCTGTTGTTCACAAGCTGATTACATAAGGCATCATAAGTTTCAGTaagttatattttcttttatggccCTCTAAAGTTTATTCGTGTTGGTTCCCGCACCAATTTTCACAGTGTAATGCACACAAAGTcctcaatttatttattttttttttttacttcgcTTTTAACCACATTTCAAACGGCCAATTGTGACCAATTTGCAGAATATGAAGCCTGTTTGTGcagattcaatttaaataaaaaaaaataatttatacataataatagcattaaaagaaaaaaaaattaattaaaaagtaaaatagccACAAAAGTATTAAGTGAGGCAGTGGACAAGCAGTACTTTGTGAATGACCTGTGAGCAAAATAGAAGTAATGCTGGGTTATTTCTCTCGCACAGACATAGACGCAATGACTTAATATAgggattattttattttgtttattataaaatacaaaagtttTCACATACTACATAAACGTATGAACCAACAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0008643 carbohydrate transport biological_process
GO:0012505 endomembrane system cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08149 SLC2A12, GLUT12; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247820.1 lncRNA downstream 31620 9867920 ~ 9877168 (-) True LOC122328702
TU231378 lncRNA downstream 77663 9782108 ~ 9831125 (-) True G156245
TU231365 lncRNA downstream 93294 9678261 ~ 9815494 (-) True G156235
TU231109 lncRNA downstream 296192 9612250 ~ 9612596 (-) True G156056
TU231107 lncRNA downstream 300840 9607488 ~ 9607948 (-) True G156054
TU231404 lncRNA upstream 33488 9951143 ~ 9952031 (-) True G156261
TU231407 lncRNA upstream 98801 10016456 ~ 10017421 (-) True G156264
TU231431 lncRNA upstream 134871 10052526 ~ 10053549 (-) True G156278
TU231439 lncRNA upstream 140356 10058011 ~ 10059303 (-) True G156283
TU231491 lncRNA upstream 194962 10112617 ~ 10115673 (-) False G156313
XM_043224541.1 mRNA downstream 23934 9883437 ~ 9884854 (-) True tcf21
XM_043224495.1 mRNA downstream 43001 9837435 ~ 9865787 (-) False eya4
XM_043224492.1 mRNA downstream 43001 9837435 ~ 9865787 (-) True eya4
XM_043224497.1 mRNA downstream 43002 9837435 ~ 9865786 (-) False eya4
XM_043224493.1 mRNA downstream 43002 9837435 ~ 9865786 (-) False eya4
XM_043224507.1 mRNA upstream 2392 9920047 ~ 9941008 (-) True sgk1
XM_043224510.1 mRNA upstream 2392 9920047 ~ 9926170 (-) False sgk1
XM_043224509.1 mRNA upstream 2392 9920047 ~ 9926168 (-) False sgk1
XM_043224511.1 mRNA upstream 2392 9920047 ~ 9925952 (-) False sgk1
XM_043224508.1 mRNA upstream 2392 9920047 ~ 9924539 (-) False sgk1
TU231376 other downstream 75106 9832128 ~ 9833682 (-) False zgc:153284
TU231375 other downstream 75155 9832128 ~ 9833633 (-) False zgc:153284
TU231374 other downstream 100419 9801785 ~ 9808369 (-) True hmgn3
TU231373 other downstream 100556 9801785 ~ 9808232 (-) False hmgn3
XR_006247818.1 other downstream 698824 9196227 ~ 9209964 (-) False ccdc187
TU231501 other upstream 312891 10230546 ~ 10231919 (-) False ankrd52a
TU231517 other upstream 319441 10237096 ~ 10239273 (-) False ankrd52a
TU231532 other upstream 447888 10365543 ~ 10367369 (-) False LOC122328779
TU231697 other upstream 758029 10675684 ~ 10678049 (-) False LOC122328798
TU232124 other upstream 1183089 11100744 ~ 11105223 (-) True G156746

Expression Profile