RNA id: XM_043224565.1


Basic Information

Item Value
RNA id XM_043224565.1
length 2439
RNA type mRNA
GC content 0.43
exon number 11
gene id ada
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14624253 ~ 14636325 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCGTAAGCCCAGCCTCATGAAACGCACGATTAGAACAAGAAACGCAGCCTGAACCTCTCTAAAGCGCGAATAGAGCGCTTCCGACACGCTCGCGAGCTTCAGTATGCCGCGTCGCGTCGGTACTAGTGTACATGTGGCGTTACCGCGCTTCTAAAAAGCTTCTAATAGGATTCCGGTTTAATCTCTTCGCTTGGCGCAGATCAGGGGCGCTTGTCAGTTTAGTTTGCTCGGTTATTGTTGTCACTCGGTCGTGTTCAGCCGCGTTTAGTTGGCTTATTGCACGCCGACGTTGTAGAGGCGGGGTTCATCGCTCATATTATCTGTTCATAAGGCGTGTTCTTTGTCCGCGCCGGGGTCGGGGTGTATAATAGTTCCGCGCATGGGGGAAGCAGAAGTTCGCCGCTCGAGCTGACAGGTTCCGAAGAGCGCGTGTCCAAGTTGTATCGCGACAGATTTACACGTCGAGTGAAGACAATGGCAGAACAGAATGGAAAACCAGCCTTTGATAAACCTAAGATTGAACTACACGTGCATCTTGATGGTGCCATTCGAATAAAGACCATTGTAGAAGTTGCAAAGCGGCGGGGAATCACTCTACCTGCGATCGGCGAGGATGAAATGAGAAACCTGGTCATAATGCATAAGCCGGCCACACTCACAGAATTCCTTGGCAAGTTCAGTCACTACATGCATGCCATTGCAGGGGACAGGGAGGCCATCAAGAGAATAGCTTATGAGTTTGTAGAGACAAAGGCCAAAGAGGGAGTGATCTATGCTGAAGCCAGATACAGCCCTCATCTGCTTGCCAACAAGGGAGTGGAACCTCTTCCTTGGGATCAAAAACCAGGAGACATCACTCCTGATGATGTGGTGAGCCTGGTGAACCAGGGGTTCAATGAGGGAGAAAAGGCCTTCAAAACCAAAGTCAGGTCCATTCTGTGCTGCATGCGTCACATGCCAAATTGGTCTATGGACATAGTTGAGCTATGTAAAAAGTATCGTAAAGATGGAGTTGTGGCAATAGACCTAGCAGGGGATGAGTCTATGAACTGTGAGTCATACCCAGGACACAAGAGAGCATTTGAggaaGCCGTCAGAAGTGAAATTCACAGAACAGTGCATGCAGGAGAAGTGGGCCCTGCTAGTGTGGTGAAGGAGGCTGTGGAGGTTCTGAAAGCAGAACGCATTGGACATGGATACCACACGCTTGAAGATCAAGCCCTGTATAAACGACTGCTCCAACAGAACATGCATTTTGAGGTATGTCCTGTCTCTAGCAGAGTGACAGGAGCCTGTGACCCAGACTTCACTAAACATCCTCTCATCACATTAAAAAAGGACAACGCTAACTACTCCTTAAATACGGATGATCCTACCATCTTCAACTCCACCTTGAACTCAGACTACCAGGTGGTGCAGAAATACATGGATTTCACTGAAGAGGACTTCAAGAGACTGAATATAAATGCAGCCAAGTCCTGCTTTCTTCCTAAGACGGAGAAAAAGAAGCTTCTTGAACAACTCTATGAGGCTTATGGCATGCTGGAAAAAACTGGCTTTTGAGCTCAGTGCTATTATAAACACGTTTGCAGCGAGCAGAGCCTTTCAGGACATTTGCCTTCTCACACGATTGTGGCTCCTTATTCCTTAAAAACTGGAGAACTCATACGCGCATCTCCCAGtgaaattatttacacaaaacaaTAGACCACAGTCAACATcttgttcattaaaataattgttacacatgtaattcatatttcattaaCCACTATTATAGCATACTGGTTTTGACCAAATGCTGTTGCCTTTAATCTACATAAACAGTTTAACAAGCATTGTTATATCAAGTTATATCAATAGCCTAAACATGAAATATTGGtcttatttcatatttactcAAGTCTAAGTCACTATAATTTCCATCTTCTCAATATACGCACAGAACATGACCataatgaaatttttttatatgaagcaTGTTAAGCTGTATAATGTAAAAGGTGCTGTGAGAATGAAGTTAAATAATACCTCTACAATTTTACAATagcaatacaaaaaagaaaatgataaatcCAAAACATTATGCCAGAATATGATCTTATATCTGGTGCTTATCTAATGTATATTGTATACAAACCTTTAGGTAAgcgtttattattaaatatattaaaaggtTATTATTAGATGTTTGATGATGAAATGCTGTGCAAAACCCCTTTAAGTTTTGTCCTTCCTTTGTTCTAACGCCAGAGGGCATTTACCAAAAGACGGATCATATAACTCAGGTTTGAAGTTAATCAGCCTagtgaaaaataattacattttgtgtaaaaaaacaaaacaggaacaTATGGACTATATATATGCTGCGGGAAGGAAGGGACTGAGAGCTTGTCACTCTGTAAACGATCAATACAAATACTTTCGCATTTGAA

Function

GO:

id name namespace
GO:0042110 T cell activation biological_process
GO:0060169 negative regulation of adenosine receptor signaling pathway biological_process
GO:0046103 inosine biosynthetic process biological_process
GO:0006154 adenosine catabolic process biological_process
GO:0043103 hypoxanthine salvage biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:0005829 cytosol cellular_component
GO:0009897 external side of plasma membrane cellular_component
GO:0060205 cytoplasmic vesicle lumen cellular_component
GO:0030054 cell junction cellular_component
GO:0004000 adenosine deaminase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01488 add, ADA; adenosine deaminase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233838 lncRNA downstream 163236 14373720 ~ 14461017 (-) False G157906
TU233871 lncRNA downstream 180802 14383738 ~ 14443451 (-) True G157928
TU233835 lncRNA downstream 205958 14361166 ~ 14418295 (-) True G157906
TU233836 lncRNA downstream 226410 14373720 ~ 14397843 (-) False G157906
TU233861 lncRNA downstream 256624 14366559 ~ 14367629 (-) True G157920
TU233937 lncRNA upstream 15099 14651424 ~ 14729662 (-) True G157966
TU233962 lncRNA upstream 48565 14684890 ~ 14702112 (-) False LOC122328902
TU233965 lncRNA upstream 48565 14684890 ~ 14702112 (-) False LOC122328902
TU233980 lncRNA upstream 48565 14684890 ~ 14691315 (-) True LOC122328902
XR_006247854.1 lncRNA upstream 193939 14830264 ~ 14830849 (-) True LOC122328920
XM_043224258.1 mRNA downstream 34631 14570347 ~ 14589622 (-) False fitm2
XM_043224257.1 mRNA downstream 44688 14570347 ~ 14579565 (-) False fitm2
XM_043224161.1 mRNA downstream 54595 14564464 ~ 14569658 (-) True LOC122328465
XM_043225371.1 mRNA downstream 60453 14554814 ~ 14563800 (-) True senp1
XM_043224624.1 mRNA downstream 99617 14428972 ~ 14524636 (-) False lrp1ab
XM_043224382.1 mRNA upstream 35952 14672277 ~ 14679231 (-) True gdi1
XM_043224383.1 mRNA upstream 35952 14672277 ~ 14679230 (-) False gdi1
XM_043224970.1 mRNA upstream 49466 14685791 ~ 15187907 (-) False LOC122328902
XM_043224976.1 mRNA upstream 49466 14685791 ~ 15185162 (-) False LOC122328902
XM_043224971.1 mRNA upstream 49466 14685791 ~ 15185157 (-) False LOC122328902
TU233895 other downstream 34660 14581094 ~ 14589593 (-) True fitm2
TU233846 other downstream 293469 14326966 ~ 14330784 (-) True G157909
TU233040 other downstream 1341926 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 1406845 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2699603 11922844 ~ 11924650 (-) True G156985
XR_006247853.1 other upstream 711092 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1062944 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1062944 15699269 ~ 15717250 (-) False LOC122329227
TU234366 other upstream 1371781 16008106 ~ 16008915 (-) True G158231
TU234433 other upstream 1507508 16143833 ~ 16169834 (-) True G158288

Expression Profile