RNA id: XM_043224593.1


Basic Information

Item Value
RNA id XM_043224593.1
length 2187
RNA type mRNA
GC content 0.39
exon number 4
gene id guca1b
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11532641 ~ 11536011 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAAACAAAGGTTTCAAAGCAATGAATGATTTTGGTTTCCTCAAAGAACCTCTAAGTGATAAACAGttctaaaaataacttttttgtgGAATTGAAATGCACCGTGTCTGTGTTAAAAATTCTTTGCAGAAgcaacctttattttaaagactgtAACTgttagattttagtttttgtgtggCCCAAAGAGGTACGTGTCCAGACAAAATGCACCACCCTCATGAACTAGGCCAGACTTCTCTAGATCCTATTTTTGACAAACTATTAATAGTAAGAGCAGAGGGCAGAGGGGATTATGACTCAGATTGTCTGAATGATTCACAGGATTGAGTGATCAAGAGCAGATCCAGGGACCACCTTCATGTTCAGAAAAACAATGGCCAAGCAatacaaaaatatctaaatgcaATAGTATCTtgaatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatacatatataacttTGAAAAACAAAGTTTATACCAGGGGAAGGTGTCcatgataatatattttttttattattgatgtatttattttattttattgttttggtaaAGTGCTATGTTAAAGTGCATAAGAAGCAAACattatcaaaatgtattttcgcTGATCAATTATTCCATTAAATGTGAGATTTTTGTGGCCTTCAACCTGgccttcaaaagatttttttaattttatgttaatgttcTGACATGAGACCCTCGGGAGCCCTTGAACCTGAATTGAGGAATAGAACGCTCTGTGTactaaatgataaattattgcAAAGCTCTTGATCTTGTTTCAAGCTAATTGATTCAGACATGGATTGATATGAATAATCCCTTGCAGTCATGTGATCCAAAATAGTCCTTGTGCTGAATCCCAAGCCAGTAGAGCACCTTTGCTGAAAGGTTGAGGTTAGTTTTACACTTTGGTACAAACCGACTTCAGTTTTTTCCTACAATTTTAAAAGGGAAACACGTTTGTCTCTTAAATCAGACATTTTTGGTGTCGTGTCATCAGTTTGTGGAGCTTAAAGGTTTATTGGGATGTCTGGATCAGGGAGAATACCAGGACAGTGAAGCTGCCAGATGTGATAATGGACATTGCTTGTTGAGAAGAAGAGCTTGTGTTCTTTATTGACATCTTTCGCGATGGGTCAGCGACTCAGTGAGGATTCAGACGATAAAGAGATTGATGTTGCTGAACTGCAGGAGTGGTATAAAAAGTTTGTGGTTGAATGTCCGAGCGGAACCCTCTTCATGCACGAGTTTAAGAGCTTCTTTGGTGTAACTGGAAACCCAGAAGCGGCTGATTATATAGAAAACATGTTTCGTGCTTTTGATAAAAATGGGGACAACACTATTGATTTTCTGGAATACGTTGCAGCCTTGAATCTAGTGCTGCGAGGAAAGCTGGAGCACAAACTGAAAtggacttttaaaatgtatgacaaAGACGGGAGCGGCTGCATCGACAAAACAGAGCTGAAGGAGATTGTGGAGTCGATCTACCGACTAAAGAAAGCCTGCCACGGTGAACTTGACGAAGAGTGTAACCTGCTGACCCCAGATCAGGTGGTGGACCGAATATTCGAGCTGGTGGATGAGAATGGAGATGGGGAGCTGTCTCTGGATGAGTTCATTGACGGGGCACGACGTGACAAGTGGGTCATGAAGATGCTGCAAATGGACGTGAACCCCGGGGACTGGATCAATGAGCAGAGACGCCGCAGCGCCAACTTCTGAACTCCATATTCACCAGAACAACCCTTAACCAGCATATACAGAGCATGCATAGTTTCTCTTCAGTCTCTTGAAGTTCAGTCTTAGTCGTGGTTCTTTCAAGTGAATTTAAGCcatcagcaattttttttaaatgtagcggTGTATCTCCCATTTCTTTTTTGACAAACAGAATTTATTCTGTCTGCATGTAAATATTGACGTTTTCTTTATTGTTTCTTTCATTCTTGTTGTTGGGATTTGTGAAAGGCTCTCTTTTGACGACTGACTGGATTCCTGactttctattaatattttctttctccGGACAAAGTGCATCTGAGTTTATaaacaacagcgattcatttaaaattggcGTTTCTGATGTTTGTAAATACATCTGTCACCGGAAGGTCACCGTTGTAAGagcatttgcatttgtaaatttctcaaaa

Function

GO:

id name namespace
GO:0031284 positive regulation of guanylate cyclase activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0008048 calcium sensitive guanylate cyclase activator activity molecular_function

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247856.1 lncRNA downstream 155953 11376177 ~ 11376688 (-) True LOC122328925
TU232181 lncRNA downstream 178813 11353159 ~ 11353828 (-) True G156785
TU232149 lncRNA downstream 287821 11242600 ~ 11244820 (-) True G156762
TU232146 lncRNA downstream 369622 11162664 ~ 11163019 (-) True G156759
TU232102 lncRNA downstream 456680 11071410 ~ 11075961 (-) False G156726
TU232213 lncRNA upstream 3612 11539623 ~ 11540045 (-) True G156812
TU232436 lncRNA upstream 226429 11762440 ~ 11763023 (-) True G156962
TU232440 lncRNA upstream 227698 11763709 ~ 11850582 (-) False atp2b3b
TU232453 lncRNA upstream 245556 11781567 ~ 11782366 (-) True G156971
TU232457 lncRNA upstream 257592 11793603 ~ 11851710 (-) True G156972
XM_043224596.1 mRNA downstream 831 11530037 ~ 11531810 (-) True oard1
XM_043224594.1 mRNA downstream 844 11530037 ~ 11531797 (-) False oard1
XM_043224591.1 mRNA downstream 14939 11516137 ~ 11517702 (-) True LOC122328724
XM_043225019.1 mRNA downstream 25356 11490166 ~ 11507285 (-) True pard6b
XM_043225020.1 mRNA downstream 25358 11490166 ~ 11507283 (-) False pard6b
XM_043225461.1 mRNA upstream 8519 11544530 ~ 11630976 (-) False LOC122329255
XM_043225460.1 mRNA upstream 8519 11544530 ~ 11630953 (-) True LOC122329255
XM_043224282.1 mRNA upstream 102602 11638613 ~ 11651271 (-) False tasorb
XM_043224280.1 mRNA upstream 102602 11638613 ~ 11651271 (-) True tasorb
XM_043224281.1 mRNA upstream 102602 11638613 ~ 11651271 (-) False tasorb
unassigned_transcript_2621 other downstream 14560 11518010 ~ 11518081 (-) True trnah-gug_32
TU232124 other downstream 427418 11100744 ~ 11105223 (-) True G156746
TU231697 other downstream 854592 10675684 ~ 10678049 (-) False LOC122328798
TU231532 other downstream 1165272 10365543 ~ 10367369 (-) False LOC122328779
TU231517 other downstream 1293368 10237096 ~ 10239273 (-) False ankrd52a
TU232410 other upstream 205389 11741400 ~ 11746620 (-) False LOC122328546
TU232414 other upstream 205389 11741400 ~ 11746620 (-) True LOC122328546
XR_006247903.1 other upstream 206659 11742670 ~ 11742803 (-) True LOC122329333
TU232418 other upstream 208108 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other upstream 209251 11745262 ~ 11745395 (-) True LOC122329329

Expression Profile